Laboratoriet for Medicinsk Massespektrometri

  • Fredrik Bajers Vej 3B

    9220 Aalborg Øst

    Danmark

Publikationer 2012 2019

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2019
3 Citationer (Scopus)

Characterization of rat primary trigeminal satellite glial cells and associated extracellular vesicles under normal and inflammatory conditions

Vinterhøj, H. S. H., Stensballe, A., Duroux, M. & Gazerani, P., 6 jan. 2019, I : Journal of Proteomics. 190, s. 27-34 8 s.

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Neuroglia
Rats
Satellites
Lipopolysaccharides
Chemical activation

Complement mediated Klebsiella pneumoniae capsule changes

Jensen, T. S., Opstrup, K. V., Christiansen, G., Rasmussen, P. V., Thomsen, M. E., Justesen, D. L., Schønheyder, H. C., Lausen, M. & Birkelund, S., 29 aug. 2019, I : Microbes and Infection.

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Klebsiella pneumoniae
Capsules
Complement Membrane Attack Complex
Serum
Immune System
1 Citation (Scopus)

Data from quantitative serum proteomic analysis after laparoscopic gastric plication

Savedoroudi, P., Bennike, T. B., Kastaniegaard, K., Talebpour, M., Ghassempour, A. & Stensballe, A., 1 aug. 2019, I : Data in Brief. 25, 104077.

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Proteomics
Stomach
Serum
Bariatric Surgery
Proteome
6 Downloads (Pure)

Degradation of the extracellular matrix is part of the pathology of ulcerative colitis

Kirov, S., Sasson, A., Zhang, C., Chasalow, S., Dongre, A., Steen, H., Stensballe, A., Andersen, V., Birkelund, S. & Bennike, T. B., 31 jan. 2019, I : Molecular Omics. 15, 1, s. 67-76 10 s.

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Pathology
Ulcerative Colitis
Proteomics
Extracellular Matrix
Degradation

Dual strategy for reduced signal suppression effects in MALDI mass spectrometry imaging

Bastrup, J., Birkelund, S., Asuni, A., Volbracht, C. & Stensballe, A., 15 jul. 2019, I : Rapid communications in mass spectrometry : RCM.

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Mass spectrometry
Imaging techniques
3 Citationer (Scopus)

Dynamic molecular changes during the first week of human life follow a robust developmental trajectory

The EPIC Consortium, 12 mar. 2019, I : Nature Communications. 10, 1, 1092.

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Systems Biology
Molecular Dynamics Simulation
biology
Molecular dynamics
Trajectories
1 Citation (Scopus)
43 Downloads (Pure)

Exploration of extracellular vesicles from Ascaris suum provides evidence of parasite–host cross talk

Hansen, E. P., Fromm, B., Andersen, S. D., Marcilla, A., Andersen, K. L., Borup, A., Williams, A. R., Jex, A. R., Gasser, R. B., Young, N. D., Hall, R. S., Stensballe, A., Ovchinnikov, V., Yan, Y., Fredholm, M., Thamsborg, S. M. & Nejsum, P., 2019, I : Journal of Extracellular Vesicles. 8, 1, s. 1-13 13 s., 1578116.

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Ascaris suum
Parasites
Helminths
Swine
Interleukin-13

Immunobiology of monocytes and macrophages during Chlamydia trachomatis infection

Nielsen, M. L., Christiansen, G., Poulsen, T. B. G. & Birkelund, S., 1 mar. 2019, I : Microbes and Infection. 21, 2, s. 73-84 12 s.

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Chlamydia Infections
Chlamydia trachomatis
Monocytes
Macrophages
Infection

On the functional compartmentalization of the normal middle ear. Morpho-histological modelling parameters of its mucosa

Padurariu, S., Röösli, C., Røge, R., Stensballe, A., Vyberg, M., Huber, A. & Gaihede, M., jul. 2019, I : Hearing Research. 378, s. 176-184 9 s.

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Middle Ear
Mucous Membrane
Mastoid
Air
Blood Vessels
1 Downloads (Pure)
Precision Medicine
Health Care Costs
Antirheumatic Agents
Psoriatic Arthritis
Health Expenditures
1 Citation (Scopus)

Proteomic and Post-Translational Modification Profiling of Exosome-Mimetic Nanovesicles Compared to Exosomes

Kenari, A. N., Kastaniegaard, K., Greening, D. W., Shambrook, M., Stensballe, A., Cheng, L. & Hill, A. F., apr. 2019, I : Proteomics. 19, 8, 20 s., 1800161.

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Exosomes
Post Translational Protein Processing
Proteomics
Proteins
Proteome
1 Citation (Scopus)

Serum proteome changes and accelerated reduction of fat mass after laparoscopic gastric plication in morbidly obese patients

Savedoroudi, P., Bennike, T. B., Kastaniegaard, K., Talebpour, M., Ghassempour, A. & Stensballe, A., 15 jul. 2019, I : Journal of Proteomics. 203, 103373.

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Proteome
Surgery
Stomach
Fats
Weight Loss

The hard protein corona of stealth liposomes is sparse

Kristensen, K., Engel, T. B., Stensballe, A., Simonsen, J. B. & Andresen, T. L., 10 aug. 2019, I : Journal of Controlled Release. 307, s. 1-15 15 s.

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Liposomes
Protein Binding
Protein Corona
Nanomedicine
Nanostructures

The repeated 36 amino acid motif of Chlamydia trachomatis Hc2 protein binds to the major groove of DNA

Lopes Gonçalves, O. S., Christiansen, G., Holm, A., Herrmann, B., Klintstedt, M., Petersen, S. B. & Birkelund, S., 13 aug. 2019, I : Research in Microbiology.

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Amino Acid Motifs
Peptides
DNA
Chlamydia trachomatis
Fluorescence Spectrometry

Topical Administration of a Soluble TNF Inhibitor Reduces Infarct Volume After Focal Cerebral Ischemia in Mice

Yli-Karjanmaa, M., Clausen, B. H., Degn, M., Novrup, H. G., Ellman, D. G., Toft-Jensen, P., Szymkowski, D. E., Stensballe, A., Meyer, M., Brambilla, R. & Lambertsen, K. L., 2019, I : Frontiers in Neuroscience. 13, s. 781

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Topical Administration
Brain Ischemia
Middle Cerebral Artery Infarction
Stroke
Leukocytes
2018
5 Citationer (Scopus)

A Cost-Effective High-Throughput Plasma and Serum Proteomics Workflow Enables Mapping of the Molecular Impact of Total Pancreatectomy with Islet Autotransplantation

Bennike, T. B., Bellin, M. D., Xuan, Y., Stensballe, A., Møller, F. T., Beilman, G. J., Levy, O., Cruz-Monserrate, Z., Andersen, V., Steen, J., Conwell, D. L. & Steen, H., 19 apr. 2018, I : Journal of Proteome Research. 17, 5, s. 1983-1992 10 s.

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Pancreatectomy
Workflow
Autologous Transplantation
Proteomics
Throughput
2 Citationer (Scopus)
15 Downloads (Pure)

Complement C3 opsonization of Chlamydia trachomatis facilitates uptake in human monocytes

Lausen, M., Christiansen, G., Karred, N., Winther, R., Poulsen, T. B. G., Palarasah, Y. & Birkelund, S., 1 jun. 2018, I : Microbes and Infection. 20, 6, s. 328-336

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Complement C3
Chlamydia trachomatis
Monocytes
Complement C3b
Infection
1 Citation (Scopus)
65 Downloads (Pure)

Detection of glycan shedding in the blood: New class of multiple sclerosis biomarkers?

DellaValle, B., Manresa-Arraut, A., Hasseldam, H., Stensballe, A., Rungby, J., Larsen, A. & Hempel, C., 4 jun. 2018, I : Frontiers in Immunology. 9, 9 s., 1254.

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Multiple Sclerosis
Polysaccharides
Glycocalyx
Biomarkers
Blood Vessels
92 Downloads (Pure)

Dynein links engulfment and execution of apoptosis via CED-4/Apaf1 in C. elegans

Harders, R. H., Morthorst, T. H., Lande, A. D., Hesselager, M. O., Mandrup, O. A., Bendixen, E., Stensballe, A. & Olsen, A., 27 sep. 2018, I : Cell Death & Disease. 9, 10, 13 s., 1012.

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Dyneins
Apoptosis
Nuclear Envelope
Germ Cells
Caenorhabditis elegans
156 Downloads (Pure)

Identification of brain antigens recognized by autoantibodies in experimental autoimmune encephalomyelitis-induced animals treated with etomoxir or interferon-β

Mørkholt, A. S., Kastaniegaard, K., Trabjerg, M. S., Gopalasingam, G., Niganze, W., Larsen, A., Stensballe, A., Nielsen, S. & Nieland, J. D., 4 maj 2018, I : Scientific Reports. 8, 1, 11 s., 7092.

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Autoimmune Experimental Encephalomyelitis
Autoantibodies
Interferons
Multiple Sclerosis
Antigens
2 Citationer (Scopus)
94 Downloads (Pure)

Impact of red and processed meat and fibre intake on treatment outcomes among patients with chronic inflammatory diseases: protocol for a prospective cohort study of prognostic factors and personalised medicine

Christensen, R., Heitmann, B. L., Andersen, K. W., Nielsen, O. H., Sørensen, S. B., Jawhara, M., Bygum, A., Hvid, L., Grauslund, J., Wied, J., Glerup, H., Fredberg, U., Villadsen, J. A., Kjær, S. G., Fallingborg, J., Moghadd, S. A. G. R., Knudsen, T., Brodersen, J., Frøjk, J., Dahlerup, J. F. & 21 flere, Bojesen, A. B., Sorensen, G. L., Thiel, S., Færgeman, N. J., Brandslund, I., Bennike, T. B., Stensballe, A., Schmidt, E. B., Franke, A., Ellinghaus, D., Rosenstiel, P., Raes, J., Boye, M., Werner, L., Nielsen, C. L., Munk, H. L., Nexøe, A. B., Ellingsen, T., Holmskov, U., Kjeldsen, J. & Andersen, V., 1 feb. 2018, I : BMJ Open. 8, 2, 15 s., e018166.

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Precision Medicine
Chronic Disease
Cohort Studies
Prospective Studies
Life Style
91 Downloads (Pure)

Mapping of equine mesenchymal stromal cell surface proteomes for identification of specific markers using proteomics and gene expression analysis: an in vitro cross-sectional study

Bundgaard, L., Stensballe, A., Elbæk, K. J. & Berg, L. C., 25 okt. 2018, I : Stem Cell Research & Therapy. 9, 1, 10 s., 288.

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Proteome
Mesenchymal Stromal Cells
Gene expression
Proteomics
Horses
1 Citation (Scopus)

Proteomic analysis of lipopolysaccharide activated human monocytes

Nielsen, M. L., Poulsen, T. B. G., Christiansen, G., Kastaniegaard, K., Stensballe, A. & Birkelund, S., 1 nov. 2018, I : Molecular Immunology. 103, s. 257-269 13 s.

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Proteomics
Lipopolysaccharides
Monocytes
Proteins
Antigen Presentation
1 Citation (Scopus)
99 Downloads (Pure)

Relative efficiencies of peptidylarginine deiminase 2 and 4 in generating target sites for anti-citrullinated protein antibodies in fibrinogen, alpha-enolase and histone H3

Damgaard, D., Bawadekar, M., Senolt, L., Stensballe, A., Shelef, M. A. & Nielsen, C. H., 2018, I : PLOS ONE. 13, 8, 14 s., e0203214.

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phosphopyruvate hydratase
Phosphopyruvate Hydratase
fibrinogen
histones
Histones
2017
55 Citationer (Scopus)
91 Downloads (Pure)

A novel community driven software for functional enrichment analysis of extracellular vesicles data

Pathan, M., Keerthikumar, S., Chisanga, D., Alessandro, R., Ang, C-S., Askenase, P., Batagov, A. O., Benito-Martin, A., Camussi, G., Clayton, A., Collino, F., Di Vizio, D., Falcon-Perez, J. M., Fonseca, P., Fonseka, P., Fontana, S., Gho, Y. S., Hendrix, A., Hoen, E. N., Iraci, N. & 27 flere, Kastaniegaard, K., Kislinger, T., Kowal, J., Kurochkin, I. V., Leonardi, T., Liang, Y., Llorente, A., Lunavat, T. R., Maji, S., Monteleone, F., Øverbye, A., Panaretakis, T., Patel, T., Peinado, H., Pluchino, S., Principe, S., Ronquist, G., Royo, F., Sahoo, S., Spinelli, C., Stensballe, A., Thery, C., van Herwijnen, M. J. C., Wauben, M. H. M., Welton, J. L., Zhao, K. & Mathivanan, S., 2017, I : Journal of Extracellular Vesicles. 6, 1, 6 s., 1321455.

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Software
Research Personnel
Computational Biology
Databases
Extracellular Vesicles
3 Citationer (Scopus)
136 Downloads (Pure)

A proposal for a study on treatment selection and lifestyle recommendations in chronic inflammatory diseases: A Danish multidisciplinary collaboration on prognostic factors and personalised medicine

Andersen, V., Holmskov, U., Sørensen, S. B., Jawhara, M., Andersen, K. W., Bygum, A., Hvid, L., Grauslund, J., Wied, J., Glerup, H., Fredberg, U., Villadsen, J. A., Kjær, S. G., Fallingborg, J., Moghadd, S. A. G. R., Knudsen, T., Brodersen, J., Frøjk, J., Dahlerup, J. F., Nielsen, O. H. & 18 flere, Christensen, R., Bojesen, A. B., Sorensen, G. L., Thiel, S., Færgeman, N. J., Brandslund, I., Stensballe, A., Schmidt, E. B., Franke, A., Ellinghaus, D., Rosenstiel, P., Raes, J., Heitmann, B. L., Boye, M., Nielsen, C. L., Werner, L., Kjeldsen, J. & Ellingsen, T., 15 maj 2017, I : Nutrients. 9, 5, 16 s., 499.

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Precision Medicine
tumor necrosis factors
lifestyle
Life Style
medicine
5 Citationer (Scopus)
702 Downloads (Pure)

Direct identification of functional amyloid proteins by label-free quantitative mass spectrometry

Danielsen, H. N., Hansen, S. H., Herbst, F-A., Kjeldal, H., Stensballe, A., Nielsen, P. H. & Dueholm, M. S., 4 aug. 2017, I : Biomolecules. 7, 3, 9 s., 58.

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Amyloidogenic Proteins
Amyloid
Mass spectrometry
Labels
Mass Spectrometry
12 Citationer (Scopus)

Elevated levels of circulating cell-free DNA and neutrophil proteins are associated with neonatal sepsis and necrotizing enterocolitis in immature mice, pigs and infants

Nguyen, D. N., Stensballe, A., Lai, J. C., Jiang, P., Brunse, A., Li, Y., Sun, J., Mallard, C., Skeath, T., Embleton, N. D., Berrington, J. E. & Sangild, P. T., aug. 2017, I : Innate Immunity. 23, 6, s. 524-536

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Necrotizing Enterocolitis
Sepsis
Neutrophils
Swine
DNA
6 Citationer (Scopus)
83 Downloads (Pure)

Highlights of the São Paulo ISEV workshop on extracellular vesicles in cross-kingdom communication

Soares, R. P., Xander, P., Costa, A. O., Marcilla, A., Menezes-Neto, A., Del Portillo, H., Witwer, K., Wauben, M., Nolte-T Hoen, E., Olivier, M., Criado, M. F., da Silva, L. L. P., Abdel Baqui, M. M., Schenkman, S., Colli, W., Alves, M. J. M., Ferreira, K. S., Puccia, R., Nejsum, P., Riesbeck, K. & 11 flere, Stensballe, A., Hansen, E. P., Jaular, L. M., Øvstebø, R., de la Canal, L., Bergese, P., Pereira-Chioccola, V., Pfaffl, M. W., Fritz, J., Gho, Y. S. & Torrecilhas, A. C., 1 dec. 2017, I : Journal of Extracellular Vesicles. 6, 1, 1407213.

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Communication
Education
Biological Phenomena
Immunomodulation
Helminths
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leukocytes
phenotype
T-cells
Lymphocytes
lymphocytes

Melanocortin 2, 3 and 4 receptor gene expressions are downregulated in CD8+ T cytotoxic lymphocytes and CD19+ B lymphocytes in rheumatoid arthritis responding to TNFα inhibition

Andersen, M., Nagaev, I., Meyer, M. K., Nagaeva, O., Wikberg, J. E. S., Mincheva-Nilsson, L. & Andersen, G. N., 2017, I : Scandinavian Journal of Immunology. 86, 1, s. 31-39 9 s.

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Receptor, Melanocortin, Type 2
Receptor, Melanocortin, Type 3
Receptor, Melanocortin, Type 4
Cytotoxic T-Lymphocytes
Rheumatoid Arthritis
10 Citationer (Scopus)

Proteome analysis of rheumatoid arthritis gut mucosa

Bennike, T. B., Ellingsen, T., Glerup, H., Bonderup, O. K., Carlsen, T. G., Meyer, M. K., Bøgsted, M., Christiansen, G., Birkelund, S., Andersen, V. & Stensballe, A., 2017, I : Journal of Proteome Research. 16, 1, s. 346-354

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Proteome
Rheumatoid Arthritis
Mucous Membrane
Tetrahydrofolate Dehydrogenase
Biopsy
2 Citationer (Scopus)
87 Downloads (Pure)

Proteomics dataset: The colon mucosa from inflammatory bowel disease patients, gastrointestinal asymptomic rheumatoid arthritis patients, and controls

Bennike, T. B., Carlsen, T. G., Ellingsen, T., Bonderup, O. K., Glerup, H., Bøgsted, M., Christiansen, G., Birkelund, S., Andersen, V. & Stensballe, A., dec. 2017, I : Data in Brief. 15, s. 511-516 6 s.

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Inflammatory Bowel Diseases
Proteomics
Rheumatoid Arthritis
Colon
Mucous Membrane
13 Citationer (Scopus)
Endothelial cells
Pericytes
Blood-Brain Barrier
Basement Membrane
Brain
Åben adgang
Immune Tolerance
Joint Diseases
Post Translational Protein Processing
Rheumatoid Arthritis
Colon
2016
12 Citationer (Scopus)

Bovine lactoferrin regulates cell survival, apoptosis and inflammation in intestinal epithelial cells and preterm pig intestine

Nguyen, D. N., Jiang, P., Stensballe, A., Bendixen, E., Sangild, P. T. & Chatterton, D. E. W., 2016, I : Journal of Proteomics. 139, s. 95-102

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Lactoferrin
Intestines
Cell Survival
Swine
Epithelial Cells
3 Citationer (Scopus)

Characterization of a Cell-Culturing System for the Study of Contact-Independent Extracellular Vesicle Communication

Revenfeld, A. L. S., Søndergaard, E. K. L., Stensballe, A., Bæk, R., Jørgensen, M. M. & Varming, K., 26 feb. 2016, I : Journal of Circulating Biomarkers. 5, 3, 9 s., 3.

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16 Citationer (Scopus)
82 Downloads (Pure)
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Proteome
Paraffin
Formaldehyde
Biopsy
Tissue
18 Citationer (Scopus)
291 Downloads (Pure)
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Fil
4 Citationer (Scopus)
99 Downloads (Pure)

Presence of HLA-DR molecules and HLA-DRB1 mRNA in circulating CD4+ T cells

Revenfeld, A. L. S., Steffensen, R., Pugholm, L. H., Jørgensen, M. M., Stensballe, A. & Varming, K., 2016, I : Scandinavian Journal of Immunology. 84, 4, s. 211-221 11 s.

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HLA-DRB1 Chains
HLA-DR Antigens
T-Lymphocytes
Messenger RNA
Proteins
11 Citationer (Scopus)
201 Downloads (Pure)
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Fil
Proteome
Paraffin
Formaldehyde
Colon
Biopsy
4 Citationer (Scopus)

Resistin gene expression is downregulated in CD4+ T helper lymphocytes and CD14+ monocytes in rheumatoid arthritis responding to TNF-α inhibition

Nagaev, I., Andersen, M., Meyer, M. K., Nagaeva, O., Wikberg, J., Mincheva-Nilsson, L. & Andersen, G. N., 2016, I : Scandinavian Journal of Immunology. 84, 4, s. 229-236

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Helper-Inducer T-Lymphocytes
Insulin Resistance
Monocytes
Rheumatoid Arthritis
Down-Regulation
6 Citationer (Scopus)
193 Downloads (Pure)

SILAC-MS Based Characterization of LPS and Resveratrol Induced Changes in Adipocyte Proteomics: Resveratrol as Ameliorating Factor on LPS Induced Changes

Nøhr, M. K., Kroager, T. P., Sanggaard, K. W., Knudsen, A. D., Stensballe, A., Enghild, J. J., Ølholm, J., Richelsen, B. & Pedersen, S. B., 2016, I : PLoS ONE. 11, 7, 16 s., e0159747.

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resveratrol
adipocytes
Adipocytes
Proteomics
proteomics
24 Citationer (Scopus)

The Pig PeptideAtlas: a resource for systems biology in animal production and biomedicine

Hesselager, M. O., Codrea, M. C., Sun, Z., Deutsch, E. W., Bennike, T. B., Stensballe, A., Bundgaard, L., Moritz, R. L. & Bendixen, E., 2016, I : Proteomics. 16, 4, s. 634-644

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Systems Biology
Animals
Swine
Proteome
Proteomics
2 Citationer (Scopus)
169 Downloads (Pure)
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Fil
2015
1 Citation (Scopus)
301 Downloads (Pure)

Characterization of the porcine synovial fluid proteome and a comparison to the plasma proteome

Bennike, T. B., Barnaby, O., Steen, H. & Stensballe, A., 2015, I : Data in Brief. 5, s. 241-247

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Synovial Fluid
Proteome
Swine
Proteomics
Joint Diseases
13 Citationer (Scopus)
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287 Downloads (Pure)
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Fil
149 Citationer (Scopus)

EVpedia: A Community Web Portal for Extracellular Vesicles Research

Kim, D-K., Lee, J., Kim, S. R., Choi, D-S., Yoon, Y. J., Kim, J. H., Go, G., Nhung, D., Hong, K., Jang, S. C., Kim, S-H., Park, K-S., Kim, O. Y., Park, H. T., Seo, J. H., Aikawa, E., Baj-Krzyworzeka, M., van Balkom, B. W. M., Belting, M., Blanc, L. & 75 flere, Bond, V., Bongiovanni, A., Borràs, F. E., Buée, L., Buzás, E. I., Cheng, L., Clayton, A., Cocucci, E., Dela Cruz, C. S., Desiderio, D. M., Di Vizio, D., Ekström, K., Falcon-Perez, J. M., Gardiner, C., Giebel, B., Greening, D. W., Gross, J. C., Gupta, D., Hendrix, A., Hill, A. F., Hill, M. M., Nolte-'t Hoen, E., Hwang, D. W., Inal, J., Jagannadham, M. V., Jayachandran, M., Jee, Y-K., Jørgensen, M., Kim, K. P., Kim, Y-K., Kislinger, T., Lässer, C., Lee, D. S., Lee, H., van Leeuwen, J., Lener, T., Liu, M-L., Lötvall, J., Marcilla, A., Mathivanan, S., Möller, A., Morhayim, J., Mullier, F., Nazarenko, I., Nieuwland, R., Nunes, D. N., Pang, K., Park, J., Patel, T., Pocsfalvi, G., Del Portillo, H., Putz, U., Ramirez, M. I., Rodrigues, M. L., Roh, T-Y., Royo, F., Sahoo, S., Schiffelers, R., Sharma, S., Siljander, P., Simpson, R. J., Soekmadji, C., Stahl, P., Stensballe, A., Stępień, E., Tahara, H., Trummer, A., Valadi, H., Vella, L. J., Wai, S. N., Witwer, K., Yáñez-Mó, M., Youn, H., Zeidler, R. & Gho, Y. S., 2015, I : Bioinformatics. 31, 6, s. 933-939 7 s.

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