!!Projects per year
Personlig profil
Forskningsprofil
I am a Tenure-Track Assistant Professor working in the Environmental Microbiology section, and head of the Microbiomes for Sustainability and Restoration group. My interests centre on the relationship of bacteria and archaea to the natural environment, and ways microorganisms are affected by or can help mitigate human impact. The overall goal of my group is to generate and use the knowledge of these organisms to solve environmental problems related to carbon footprints, green energy and climate change, and to help facilitate ecosystem restoration efforts.
I am currently involved in Microflora Danica, investigating biogeochemical cycles through the bacteria and archaea of Denmark, and MicroFungi. The focuses of my postdoc were recovering high-quality metagenome-assembled genomes of wastewater and anaerobic digester bacteria and archaea, and investigating the metabolic potential and phylogeny of key functional groups.
I conducted my PhD at the Australian Centre for Ecogenomics (ACE) under the supervision of Prof. Gene Tyson and Dr. Ben Woodcroft and was part of an international team exploring the microbes in thawing permafrost. I received my Honours degree at ACE under the supervision of Prof. Phil Hugenholtz.
Fingeraftryk
- 1 Lignende profiler
Samarbejde og topforskningsområder i de sidste fem år
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MicroFungi – Identify, map and explore the importance of soil fungal communities for soil health assessment and ecosystem quality across Denmark
Albertsen, M. (PI (principal investigator)), Nielsen, P. H. (PI (principal investigator)), Hugenholtz, P. (PI (principal investigator)), Singleton, C. M. (PI (principal investigator)), Sereika, M. (Projektdeltager), Chaumeil, P.-A. (Projektdeltager), Chuvochina, M. (Projektdeltager), Parks, D. H. (Projektdeltager), Rodriguez Rojas, M. (PI (principal investigator)), Kale, V. (Projektdeltager), Normand, S. (PI (principal investigator)), Greve, M. H. (PI (principal investigator)) & Wollesen de Jonge, L. (PI (principal investigator))
01/09/2025 → 31/08/2028
Projekter: Projekt › Forskning
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CArBiVoRe: Using Bacteria, Archaea and their Viruses to Assess Peatland Health and Predict Restoration Success
Singleton, C. M. (PI (principal investigator))
Projekter: Projekt › Forskning
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Unlocking the Microbial Secrets of Biogas Reactors: From DNA Sequencing to Yield Maximization
Jiang, C. (PI (principal investigator)), Nielsen, P. H. (Supervisor) & Singleton, C. M. (Supervisor)
01/06/2024 → 31/05/2026
Projekter: Projekt › Forskning
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AD genomes: High-throughput full-genome characterisation of the microbes responsible for efficient biogas production in anaerobic digesters
Singleton, C. M. (PI (principal investigator)) & Jiang, C. (Projektdeltager)
01/04/2021 → 20/12/2024
Projekter: Projekt › Forskning
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REPARES: Research platform on antibiotic resistance spread through wastewater treatment plants
Nielsen, P. H. (PI (principal investigator)), Hove Hansen, S. (Projektdeltager), Nierychlo, M. A. (Projektdeltager) & Singleton, C. M. (Projektdeltager)
01/10/2019 → 30/06/2023
Projekter: Projekt › Forskning
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Long-Read Metagenome-Assembled Genomes Improve Identification of Novel Complete Biosynthetic Gene Clusters in a Complex Microbial Activated Sludge Ecosystem
Sanchez Navarro, R., Nuhamunada, M., Mohite, O., Wasmund, K., Albertsen, M., Gram, L., Nielsen, P. H., Weber, T. & Singleton, C. M., 29 nov. 2022, I: mSystems. 7, 6, e00632-22.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review
Åben adgangFil33 Link åbnes på en ny fane Citationer (Scopus)191 Downloads (Pure) -
Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing
Singleton, C. M., Petriglieri, F., Kristensen, J. M., Kirkegaard, R. H., Michaelsen, T. Y., Andersen, M. H., Kondrotaite, Z., Karst, S. M., Dueholm, M. S., Nielsen, P. H. & Albertsen, M., 31 mar. 2021, I: Nature Communications. 12, 1, 13 s., 2009.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review
Åben adgangFil258 Link åbnes på en ny fane Citationer (Scopus)356 Downloads (Pure) -
Genome-centric view of carbon processing in thawing permafrost
Woodcroft, B. J., Singleton, C. M., Boyd, J. A., Evans, P. N., Emerson, J. B., Zayed, A. A. F., Hoelzle, R. D., Lamberton, T. O., McCalley, C. K., Hodgkins, S. B., Wilson, R. M., Purvine, S. O., Nicora, C. D., Li, C., Frolking, S., Chanton, J. P., Crill, P. M., Saleska, S. R., Rich, V. I. & Tyson, G. W., 2 aug. 2018, I: Nature. 560, 7716, s. 49-54 6 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review
348 Link åbnes på en ny fane Citationer (Scopus) -
The novel genus, ‘Candidatus Phosphoribacter’, previously identified as Tetrasphaera, is the dominant polyphosphate accumulating lineage in EBPR wastewater treatment plants worldwide
Singleton, C. M., Petriglieri, F., Wasmund, K., Nierychlo, M., Kondrotaite, Z., Petersen, J. F., Peces, M., Dueholm, M. S., Wagner, M. & Nielsen, P. H., jun. 2022, I: ISME Journal. 16, 6, s. 1605-1616 12 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review
Åben adgangFil89 Link åbnes på en ny fane Citationer (Scopus)222 Downloads (Pure) -
A genomic view of the reef-building coral Porites lutea and its microbial symbionts
ReFuGe2020 Consortium, 1 dec. 2019, I: Nature Microbiology. 4, 12, s. 2090-2100 11 s.Publikation: Bidrag til tidsskrift › Letter › peer review
212 Link åbnes på en ny fane Citationer (Scopus)
Aktiviteter
- 3 Konferenceoplæg
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MicroFlora Danica: Diversity, homogenisation, and the hidden nitrifiers of Denmark’s microbial atlas
Singleton, C. M. (Foredragsholder), Knudsen, K. S. (Foredragsholder), Jensen, T. B. N. (Foredragsholder), Speth, D. R. (Foredragsholder), Delogu, F. (Foredragsholder), Yang, Y. (Foredragsholder), Sereika, M. (Foredragsholder), Mølvang Dall, S. (Foredragsholder), Kirkegaard, R. H. (Foredragsholder), Kristensen, J. M. (Foredragsholder), Woodcroft, B. J. (Foredragsholder), Aroney, S. T. N. (Foredragsholder), Dueholm, M. K. D. (Foredragsholder), Wagner, M. (Foredragsholder), Nielsen, P. H. (Foredragsholder) & Albertsen, M. (Foredragsholder)
23 jun. 2025Aktivitet: Foredrag og mundtlige bidrag › Konferenceoplæg
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Identifying and exploring epiphytic bacteria in wastewater treatment plants: unveiling their symbiotic role
Kondrotaite, Z. (Oplægsholder), Petriglieri, F. (Andet), Nierychlo, M. A. (Andet), Jiang, C. (Andet), Singleton, C. M. (Andet) & Nielsen, P. H. (Andet)
2025 → …Aktivitet: Foredrag og mundtlige bidrag › Konferenceoplæg
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MAGnifying biogas production efficiency: high-quality metagenome-assembled genome recovery in anaerobic digesters reveals abundant novel populations with key functional roles
Singleton, C. M. (Oplægsholder), Jiang, C. (Andet), Liu, L. (Andet), Kirkegaard, R. H. (Andet), Dueholm, M. K. D. (Andet) & Nielsen, P. H. (Andet)
12 sep. 2023Aktivitet: Foredrag og mundtlige bidrag › Konferenceoplæg
Fil
Presse/medier
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Debat: Stop med at grave fremtidens klima op af jorden
26/05/2026
4 elementer af Mediedækning
Presse/medie
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Mikrober, der lever af luften: Skjulte metanædere fra huler til landskaber er med til at forme Jordens atmosfære
Singleton, C. M. & Knudsen, K. S.
02/04/2026
1 element af Mediedækning
Presse/medie
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Gases power diverse microbial life in caves
Singleton, C. M. & Knudsen, K. S.
26/01/2026
1 element af Mediedækning
Presse/medie