The Microbiome of Denmark

Albertsen, Mads (PI (principal investigator))
Nielsen, Per Halkjær (PI (principal investigator))
Jensen, Thomas Bygh Nymann (Projektdeltager)
Sørensen, Emil Aarre (Projektdeltager)
Sereika, Mantas (Projektdeltager)
Dottorini, Giulia (Projektdeltager)
Petriglieri, Francesca (Projektdeltager)
Jørgensen, Vibeke Rudkjøbing (Projektdeltager)
Kirkegaard, Rasmus Hansen (Projektdeltager)
Yang, Yu (Projektdeltager)
Karst, Søren Michael (Projektdeltager)
Giguere, Andrew Tyler (Projektdeltager)
Knutsson, Simon (Projektdeltager)
Singleton, Caitlin Margaret (Projektdeltager)
Dueholm, Morten Kam Dahl (Projektdeltager)
Mølvang Dall, Sebastian (Projektdeltager)
Kristensen, Jannie Munk (Projektdeltager)
Delogu, Francesco (Projektdeltager)
Rodriguez Rojas, Miguel (PI (principal investigator))
Kale, Varsha (Projektdeltager)

Beskrivelse

Identification of life is essential to our understanding of the world. Traditionally, the focus has been on objects we can recognize with our eyes, such as plants and animals. However, in the last decades it has become evident that microorganisms, small cells invisible to the naked eye, are involved in all aspects of our lives. From making us sick or keeping us healthy, to climate change and sustainable biotechnology production.

Microflora Danica is aiming to describe the microbiome of Denmark. Our ambition is to discover and characterize the microbial diversity across all parts and habitats of Denmark through the analysis of 10.000 representative samples.

Akronym	Microflora Danica
Status	Afsluttet
Effektiv start/slut dato	01/01/2019 → 31/12/2025

Finansiering

Poul Due Jensens Fond: 8.252.151,00 kr.
Poul Due Jensens Fond: 18.922.033,00 kr.
Poul Due Jensens Fond: 9.439.426,00 kr.
Poul Due Jensens Fond: 6.000.000,00 kr.

High-throughput recovery of microbial genomes from complex soil communities with deep, long-read Nanopore sequencing
Sereika, M. (Oplægsholder)
21 okt. 2024
Aktivitet: Foredrag og mundtlige bidrag › Konferenceoplæg

Fil
National landscape of environmental resistome in Denmark
Yang, Y. (Oplægsholder)
30 jan. 2024
Aktivitet: Foredrag og mundtlige bidrag › Konferenceoplæg
Poster presentation: National scale resistome surveillance and dissemination potential assessment in Denmark
Yang, Y. (Oplægsholder)
12 sep. 2023
Aktivitet: Foredrag og mundtlige bidrag › Konferenceoplæg

Viden om mikroorganismer forbinder kultur og bæredygtighed
Albertsen, M. (Deltager) & Nielsen, P. H. (Deltager)
Impact: Grøn impact, Kulturel impact, Anden impact

12 Tidsskriftartikel
9 Poster
2 Konferenceabstrakt til konference
2 Ph.d.-afhandling
Mere

Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats
Sereika, M., Mussig, A. J., Jiang, C., Knudsen, K. S., Jensen, T. B. N., Petriglieri, F., Yang, Y., Jørgensen, V. R., Delogu, F., Sørensen, E. A., Nielsen, P. H., Singleton, C. M., Hugenholtz, P. & Albertsen, M., aug. 2025, I: Nature Microbiology. 10, 8, s. 2018-2030 13 s.
Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

Åben adgang
Fil
11 Link åbnes i en ny fane Citationer (Scopus)

17 Downloads (Pure)
Joint Additive Gaussian Processes for Microbial Species Distribution Modeling
Heede, T., Celikkanat, A., Delogu, F., Masegosa, A., Albertsen, M. & Nielsen, T. D., maj 2025, 13th Workshop on Uncertainty Processing. Studený, M., Capotorti, N. A. A., Csirmaz, L., Jiroušek, R., Kleiter, G. D. & Shenoy, P. P. (red.). MatfyzPress, s. 128-139 12 s.
Publikation: Bidrag til bog/antologi/rapport/konference proceeding › Konferenceartikel i proceeding › Forskning

Åben adgang
Proposal of Patescibacterium danicum gen. nov., sp. nov. in the ubiquitous bacterial phylum Patescibacteriota phyl. nov
Dutkiewicz, Z., Singleton, C. M., Sereika, M., Villada, J. C., Mussig, A. J., Chuvochina, M., Albertsen, M., Schulz, F., Woyke, T., Nielsen, P. H., Hugenholtz, P. & Rinke, C., jan. 2025, I: ISME communications. 5, 1, 11 s., ycae147.
Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

Åben adgang
Fil
8 Link åbnes i en ny fane Citationer (Scopus)

12 Downloads (Pure)

Levende jord – et kunstprojekt på Viborg Gymnasium
27/02/2026
1 element af Mediedækning
Presse/medie
AAU står bag årets største videnskabelige gennembrud i Danmark
Albertsen, M. & Nielsen, P. H.
25/12/2025 → 27/12/2025
4 elementer af Mediedækning
Presse/medie
Nordjysk projekt kåret som "Årets forskningsresultat"
Albertsen, M.
19/12/2025 → 20/12/2025
3 elementer af Mediedækning
Presse/medie

The Microbiome of Denmark

Projektdetaljer

Beskrivelse

Finansiering

Fingerprint

High-throughput recovery of microbial genomes from complex soil communities with deep, long-read Nanopore sequencing

National landscape of environmental resistome in Denmark

Poster presentation: National scale resistome surveillance and dissemination potential assessment in Denmark

Viden om mikroorganismer forbinder kultur og bæredygtighed

Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats

Joint Additive Gaussian Processes for Microbial Species Distribution Modeling

Proposal of Patescibacterium danicum gen. nov., sp. nov. in the ubiquitous bacterial phylum Patescibacteriota phyl. nov

Levende jord – et kunstprojekt på Viborg Gymnasium

AAU står bag årets største videnskabelige gennembrud i Danmark

Nordjysk projekt kåret som "Årets forskningsresultat"

The Microbiome of Denmark

Projektdetaljer

Beskrivelse

Finansiering

Fingerprint

Aktiviteter

Impacts

Publikation

Presse/medier