Projects per year
Fingerprint
Dive into the research topics where Microbial Metagenomics is active. These topic labels come from the works of this organisation's members. Together they form a unique fingerprint.
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
Profiles
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MicroFungi – Identify, map and explore the importance of soil fungal communities for soil health assessment and ecosystem quality across Denmark
Albertsen, M. (PI), Nielsen, P. H. (PI), Hugenholtz, P. (PI), Singleton, C. M. (PI), Sereika, M. (Project Participant), Chaumeil, P.-A. (Project Participant), Chuvochina, M. (Project Participant), Parks, D. H. (Project Participant), Rodriguez Rojas, M. (PI), Kale, V. (Project Participant), Normand, S. (PI), Greve, M. H. (PI) & Wollesen de Jonge, L. (PI)
01/09/2025 → 31/08/2028
Project: Research
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AI:EcoNet
Ørsted, M. (PI), Celikkanat, A. (PI), Markoff, H. (Project Participant), Sønnichsen, K. A. (Project Participant), Li, S. (Project Participant), Herrmann, N. (Project Participant), Albertsen, M. (Project Participant) & Nielsen, T. D. (Project Participant)
01/08/2025 → 31/07/2028
Project: Research
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SeeQ Diagnostics
Albertsen, M. (PI), Eneberg, M. (Project Participant) & Eskildsen, A. M. F. (Project Participant)
01/04/2025 → 31/03/2028
Project: Research
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A national baseline for methane sink habitats and methanotroph diversity
Knudsen, K. S., Sereika, M., Jensen, T. B. N., Delogu, F., Schmider, T., Jiang, C., Kirkegaard, R. H., Tveit, A. T., Nielsen, P. H., Albertsen, M. & Singleton, C. M., 2 Feb 2026, bioRxiv, 47 p.Research output: Working paper/Preprint › Preprint
Open Access -
Nanopore sequencing reaches amplicon sequence variant (ASV) resolution
Riisgaard-Jensen, M., Villanelo, S. A. R., Andersen, K. S., Kirkegaard, R., Hansen, S. H., Jiang, C., Stefansen, A. V., Thomsen, J. H. D., Nielsen, P. H. & Dueholm, M. K. D., 28 Feb 2026, bioRxiv, 18 p.Research output: Working paper/Preprint › Preprint
Open Access -
Sensitive long-read amplicon sequence variant recovery with savont
Shaw, J., Riisgaard-Jensen, M., Andersen, K. S., Kirkegaard, R. H., Dueholm, M. K. D. & Li, H., 29 May 2026, bioRxiv, 18 p.Research output: Working paper/Preprint › Preprint
Open Access
Datasets
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Study protocol for "Application of rapid Nanopore metagenomic cell-free DNA sequencing to diagnose bloodstream infections: a prospective observational study"
Nielsen, M. E. (Creator), Nielsen, H. L. (Creator) & Albertsen, M. (Supervisor), medRxiv, 15 May 2024
DOI: 10.1101/2024.05.09.24307053
Dataset: Supplementary material
File -
Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark
Michaelsen, T. Y. (Creator), Bennedbæk, M. (Creator), Christiansen, L. E. (Creator), Jørgensen, M. S. F. (Creator), Møller, C. H. (Creator), Sørensen, E. A. (Creator), Knutsson, S. (Creator), Brandt, J. (Creator), Jensen, T. B. N. (Creator), Chiche-Lapierre, C. E. (Creator), Collados, E. F. (Creator), Sørensen, T. (Creator), Petersen, C. (Creator), Le-Quy, V. (Creator), Sereika, M. (Creator), Hansen, F. T. (Creator), Rasmussen, M. (Creator), Fonager, J. (Creator), Karst, S. M. (Creator), Marvig, R. L. (Creator), Stegger, M. (Creator), Sieber, R. N. (Creator), Skov, R. (Creator), Legarth, R. (Creator), Krause, T. G. (Creator), Fomsgaard, A. (Creator) & Albertsen, M. (Creator), Figshare, 4 May 2022
DOI: 10.6084/m9.figshare.c.5978621, https://springernature.figshare.com/collections/Introduction_and_transmission_of_SARS-CoV-2_lineage_B_1_1_7_Alpha_variant_in_Denmark/5978621
Dataset
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Additional file 2 of Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark
Michaelsen, T. Y. (Creator), Bennedbæk, M. (Creator), Christiansen, L. E. (Creator), Jørgensen, M. S. F. (Creator), Møller, C. H. (Creator), Sørensen, E. A. (Creator), Knutsson, S. (Creator), Brandt, J. (Creator), Jensen, T. B. N. (Creator), Chiche-Lapierre, C. (Creator), Collados, E. F. (Creator), Sørensen, T. (Creator), Petersen, C. (Creator), Le-Quy, V. (Creator), Sereika, M. (Creator), Hansen, F. T. (Creator), Rasmussen, M. (Creator), Fonager, J. (Creator), Karst, S. M. (Creator), Marvig, R. L. (Creator), Stegger, M. (Creator), Sieber, R. N. (Creator), Skov, R. (Creator), Legarth, R. (Creator), Krause, T. G. (Creator), Fomsgaard, A. (Creator) & Albertsen, M. (Creator), Figshare, 4 May 2022
DOI: 10.6084/m9.figshare.19703921, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Introduction_and_transmission_of_SARS-CoV-2_lineage_B_1_1_7_Alpha_variant_in_Denmark/19703921
Dataset
Prizes
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Queen Margrethe II's research prize 2024
Albertsen, M. (Recipient), 27 Mar 2024
Prize: Research, education and innovation prizes
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Clarivate Highly Cited Researcher
Albertsen, M. (Recipient), 2024
Prize: Research, education and innovation prizes
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Activities
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MicroFlora Danica: Diversity, homogenisation, and the hidden nitrifiers of Denmark’s microbial atlas
Singleton, C. M. (Lecturer), Knudsen, K. S. (Lecturer), Jensen, T. B. N. (Lecturer), Speth, D. R. (Lecturer), Delogu, F. (Lecturer), Yang, Y. (Lecturer), Sereika, M. (Lecturer), Mølvang Dall, S. (Lecturer), Kirkegaard, R. H. (Lecturer), Kristensen, J. M. (Lecturer), Woodcroft, B. J. (Lecturer), Aroney, S. T. N. (Lecturer), Dueholm, M. K. D. (Lecturer), Wagner, M. (Lecturer), Nielsen, P. H. (Lecturer) & Albertsen, M. (Lecturer)
23 Jun 2025Activity: Talks and presentations › Conference presentations
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Danish Comprehensive Cancer Center ctDNA Research Center - 2024 Yearly Meeting
Nielsen, M. E. (Participant)
11 Nov 2024 → 12 Nov 2024Activity: Attending an event › Conference organisation or participation
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Rapid bloodstream infection diagnostics enabled by Nanopore plasma metagenomic DNA sequencing
Nielsen, M. E. (Lecturer)
11 Nov 2024Activity: Talks and presentations › Conference presentations
Press/Media
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Kongen navngiver bakterier i Aalborg
08/05/2026 → 09/05/2026
4 items of Media coverage
Press/Media: Press / Media
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Royale bakterier: Kongen på besøg i nordjysk laboratorium
08/05/2026
1 item of Media coverage
Press/Media: Press / Media
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Kongen kom forbi og gav bakterier navn
Albertsen, M. & Nielsen, P. H.
08/05/2026
1 item of Media coverage
Press/Media: Press / Media
Impacts
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Knowledge of microorganisms connecting culture and sustainability
Albertsen, M. (Participant) & Nielsen, P. H. (Participant)
Impact: Green impact, Cultural impact, Other impact