Jeppe Emmersen

  • Niels Jernes Vej 10, Dekanat

    9220 Aalborg Ø

    Denmark

19972019
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Research Output 1997 2019

2019
6 Downloads (Pure)

Contention over undergraduate medical curriculum content

Andersen, S., Stentoft, D., Emmersen, J., Rasmussen, S., Birkelund, S. & Nøhr, S., 16 Dec 2019, In : International Journal of Medical Education. 10, p. 230-231 2 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
2018
3 Citations (Scopus)
148 Downloads (Pure)

Hypoxia enhances differentiation of adipose tissue-derived stem cells toward the smooth muscle phenotype

Wang, F., Zachar, V., Pennisi, C. P., Fink, T., Maeda, Y. & Emmersen, J., 2018, In : International Journal of Molecular Sciences . 19, 2, 12 p., 517.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
adipose tissues
smooth muscle
phenotype
stem cells
hypoxia
3 Citations (Scopus)
110 Downloads (Pure)

Pigmentation is associated with stemness hierarchy of progenitor cells within cultured limbal epithelial cells

Liu, L., Nielsen, F. M., Emmersen, J., Bath, C., Hjortdal, J. Ø., Riis, S., Fink, T., Pennisi, C. P. & Zachar, V., Sep 2018, In : Stem Cells. 36, 9, p. 1411-1420 10 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
Pigmentation
Stem Cells
Epithelial Cells
Adenosine Triphosphate
Keratin-3
2 Citations (Scopus)

Regeneration of the oesophageal muscle layer from oesophagus acellular matrix scaffold using adipose-derived stem cells

Wang, F., Maeda, Y., Zachar, V., Ansari, T. & Emmersen, J., 3 Sep 2018, In : Biochemical and Biophysical Research Communications. 503, 1, p. 271-277 7 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Stem cells
Scaffolds
Esophagus
Muscle
Regeneration
2017
2 Citations (Scopus)
291 Downloads (Pure)
Open Access
File
Stem cells
Sorting
Flow Cytometry
Stem Cells
Epithelial Cells

Molecular mechanisms of smooth muscle cell differentiation from adipose-derived stem cell

Wang, F. & Emmersen, J., 2017, The Stem Cell Microenvironment and its Role in Regenerative Medicine and Cancer Pathogenesis. Pennisi, C. P., Prasad, M. S. & Rameshwar, P. (eds.). River Publishers, p. 103-113 (River Publishers Series in Research and Business Chronicles: Biotechnology and Medicine; No. 7).

Research output: Contribution to book/anthology/report/conference proceedingBook chapterResearchpeer-review

Selective expansion of limbal epithelial stem cells in culture using hypoxia

Bath, C., Yang, S., Muttuvelu, D., Fink, T., Emmersen, J., Vorum, H., Hjortdal, J. & Zachar, V., 2017, The Stem Cell Microenvironment and its Role in Regenerative Medicine and Cancer Pathogenesis. Pennisi, C. P., Prasad, M. S. & Rameshwar, P. (eds.). River Publishers, p. 1-11 (River Publishers Series in Research and Business Chronicles: Biotechnology and Medicine; No. 7).

Research output: Contribution to book/anthology/report/conference proceedingBook chapterResearchpeer-review

2016
8 Citations (Scopus)

Hypoxia enhances differentiation of adipose-derived stem cells to smooth muscle cells

Wang, F., Zachar, V., Pennisi, C. P., Fink, T., Maeda, Y. & Emmersen, J., 2016, Abstracts, The American Society of Colon and Rectal Surgeons Annual Scientific Meeting, ASCRS, 30 April-4 May 2016, Los Angeles, CA, USA. American Society of Colon and Rectal Surgeons, p. 50-51 P1

Research output: Contribution to book/anthology/report/conference proceedingConference abstract in proceedingResearchpeer-review

Open Access

Hypoxia enhances differentiation of adipose-derived stem cells to smooth muscle cells

Wang, F., Zachar, V., Pennisi, C. P., Fink, T., Maeda, Y. & Emmersen, J., 2016, In : Diseases of the Colon and Rectum. 59, 5, p. E123 P1.

Research output: Contribution to journalConference abstract in journalResearchpeer-review

19 Citations (Scopus)
326 Downloads (Pure)
Open Access
File
2015

Case-based learning

Krogh, L., Stentoft, D., Emmersen, J. & Musaeus, P., 2015, University Teaching and Learning. Rienecker, L., Jørgensen, P. S., Dolin, J. & Ingerslev, G. H. (eds.). Samfundslitteratur, p. 201-214

Research output: Contribution to book/anthology/report/conference proceedingBook chapterResearchpeer-review

2014

Effects of hypoxia on differentiation of smooth muscle cells from human adipose derived stem cells

Emmersen, J., 2014, Proceedings of the 5th Disputationes : Addressing Organ Regeneration and Tissue Repair by Artificial Supports, 12-13 May 2014, Aalborg, Denmark.

Research output: Contribution to book/anthology/report/conference proceedingConference abstract in proceedingResearch

From cases to projects in problem-based medical education

Stentoft, D., Duroux, M., Fink, T. & Emmersen, J., 2014, In : Journal of Problem Based Learning in Higher Education. 2, 1, p. 45-62

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
12 Citations (Scopus)

Uniaxial cyclic strain enhances adipose-derived stem cell fusion with skeletal myocytes

Andersen, J. I., Juhl, M., Nielsen, T., Emmersen, J., Fink, T., Zachar, V. & Pennisi, C. P., 2014, In : Biochemical and Biophysical Research Communications. 450, 2, p. 1083-1088

Research output: Contribution to journalJournal articleResearchpeer-review

2013

Case-baseret undervisning

Krogh, L., Mussaeus, P., Stentoft, D. & Emmersen, J., 2013, Universitetspædagogik. Rienecker, L., Jørgensen, P. S., Dolin, J. & Ingerslev, G. H. (eds.). Samfundslitteratur, p. 201-214 14 p.

Research output: Contribution to book/anthology/report/conference proceedingBook chapterResearchpeer-review

Correction: Transcriptional Dissection of Human Limbal Niche Compartments by Massive Parallel Sequencing

Søndergaard, C. B., Muttuvelu, D., Emmersen, J., Vorum, H., Hjortdal, J. & Zachar, V., 2013, In : P L o S One. 8, 11

Research output: Contribution to journalComment/debateResearchpeer-review

Dissection
niches
16 Citations (Scopus)

Hypoxia is a key regulator of limbal epithelial stem cell growth and differentiation

Søndergaard, C. B., Yang, S., Muttuvelu, D. V., Fink, T., Emmersen, J., Vorum, H., Hjortdal, J. Ø. & Zachar, V., May 2013, In : Stem Cell Research. 10, 3, p. 349–360 12 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Cell Differentiation
Stem Cells
Epithelial Cells
Oxygen
Growth

PBL and critical thinking disposition in Chinese medical students: – A randomized cross-sectional study

Du, X., Emmersen, J., Toft, E. & Sun, B., 2013, In : Journal of Problem Based Learning in Higher Education. 1, 1, p. 72-83 11 p.

Research output: Contribution to journalJournal articleResearchpeer-review

cross-sectional study
disposition
medical student
learning
simulation

Reflection on the Diversity and Change of PBL From a Comparison of Three PBL Models in Medical Education

Du, X., Emmersen, J., Fink, T., Toft, E. & Sun, B., 30 Sep 2013, Visions, Challenges, and Strategies: PBL Principles and Methodologies in a Danish and Global Perspective. Krogh, L. & Jensen, A. A. (eds.). 1 ed. Aalborg Universitet: Aalborg Universitetsforlag, p. 221-241 21 p.

Research output: Contribution to book/anthology/report/conference proceedingBook chapterResearchpeer-review

18 Citations (Scopus)

Transcriptional dissection of human limbal niche compartments by massive parallel sequencing

Søndergaard, C. B., Muttuvelu, D., Emmersen, J., Vorum, H., Hjortdal, J. Ø. & Zachar, V., 2013, In : P L o S One. 8, 5, e64244.

Research output: Contribution to journalJournal articleResearchpeer-review

Dissection
Stem cells
niches
Genes
stem cells
2012

Oxygen is a key regulator of limbal epithelial stem cell growth and differentiation

Bath, C., Yang, S., Muttuvelu, D. V., Emmersen, J., Vorum, H., Hjortdal, J. Ø. & Zachar, V., 2012, Forskningens Dag 19. april 2012: Abstracts og program. Aalborg Sygehus, Århus Universitetshospital, p. 63, No. 91

Research output: Contribution to book/anthology/report/conference proceedingConference abstract in proceedingResearch

2011
30 Citations (Scopus)

Adipose-derived stem cells from the brown bear (Ursus arctos) spontaneously undergo chondrogenic and osteogenic differentiation in vitro

Fink, T., Rasmussen, J., Emmersen, J., Pilgaard, L., Fahlman, Å., Brunberg, S., Josefsson, J., Arnemo, J. M., Zachar, V., Swenson, J. E. & Fröbert, O., 2011, In : Stem Cell Research. 7, 1, p. 89-95

Research output: Contribution to journalJournal articleResearchpeer-review

34 Citations (Scopus)

Hypoxia and adipose-derived stem cell-based tissue regeneration and engineering

Zachar, V., Duroux, M., Emmersen, J., Rasmussen, J. G., Pennisi, C. P., Yang, S. & Fink, T., 2011, In : Expert Opinion on Biological Therapy. 11, 6, p. 775-786

Research output: Contribution to journalJournal articleResearchpeer-review

2010
116 Citations (Scopus)

Powdery mildew fungal effector candidates share N-terminal Y/F/WxC-motif

Godfrey, D., Böhlenius, H., Pedersen, C., Zhang, Z., Emmersen, J. & Thordal-Christensen, H., 2010, In : BMC Genomics. 11, p. 317 13 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Variation in cellular expression patterns during differentiation of adipose-derived stem cell to smooth muscle cell

Maeda, Y., Zachar, V. & Emmersen, J., 2010, UEGW 2010 Abstract Book, 18th United European Gastroenterology Week, 23-27 October 2010, Barcelona, Spain. p. A108, No. P0007

Research output: Contribution to book/anthology/report/conference proceedingConference abstract in proceedingResearch

45 Citations (Scopus)

Transcript elongation factor TFIIS is involved in Arabidopsis seed dormancy

Grasser, M. E., Kane, C. M., Merkle, T., Melzer, M., Emmersen, J. & Grasser, K. D., 2009, In : Journal of Molecular Biology. 386, 3, p. 598-611

Research output: Contribution to journalJournal articleResearchpeer-review

37 Citations (Scopus)

Transcriptional signature of human adipose tissue-derived stem cells (hASCs) preconditioned for chondrogenesis in hypoxic conditions

Pilgaard, L., Lund, P., Duroux, M., Lockstone, H., Taylor, J., Emmersen, J., Fink, T., Ragoussis, J. & Zachar, V., 2009, In : Experimental Cell Research. 315, 11, p. 1937-1952

Research output: Contribution to journalJournal articleResearchpeer-review

2008
6 Citations (Scopus)

DeepSAGE – tag based transcriptome analysis beyond microarrays.

Nielsen, K. L., Petersen, A. H. & Emmersen, J., 2008, Next generation genome sequencing - towards personalized medicine. Janitz, M. (ed.). Berlin, Germany: Wiley-VCH

Research output: Contribution to book/anthology/report/conference proceedingBook chapterResearch

1 Citation (Scopus)

Duplicate Ditag analysis in LongSAGE

Emmersen, J., 2008, In : Methods in Molecular Biology. 387, p. 143-150

Research output: Contribution to journalJournal articleResearchpeer-review

Escherichia coli Isolates Causing Meningitis Appear Genetically Less Heterogeneous Compared With Other Invasive Isolates Causing Bacteremia

Bukh, A. S., Emmersen, J., Olesen, S. B., Roslev, P. & Schønheyder, H. C., 2008. 1 p.

Research output: Contribution to conference without publisher/journalPosterResearch

1 Citation (Scopus)

Extraction and Annotation of SAGE tags using Sequence Quality values

Emmersen, J., 2008, Methods in Molecular Biology: Serial Analysis of Gene Expression (SAGE) – Digital Gene Expression Profiling. Nielsen, K. L. (ed.). Humana Press

Research output: Contribution to book/anthology/report/conference proceedingBook chapterResearch

Phylogenetic Groups and Antibiotic Resistance in Community-Acquired Escherichia coli Bacteremia

Schønheyder, H. C., Bukh, A. S., Søgaard, M., Emmersen, J., Olesen, S. B. & Roslev, P., 2008. 1 p.

Research output: Contribution to conference without publisher/journalPosterResearch

25 Citations (Scopus)

The expression level of the chromatin-associated HMGB1 protein influences growth, stress tolerance and transcriptome in Arabidopsis

Launholt, D., Pedersen, D. S., Kalamajka, R., Emmersen, J., Houben, A. & Grasser, K. D., 2008, In : Journal of Molecular Biology. 384, 1, p. 9-21

Research output: Contribution to journalJournal articleResearchpeer-review

Transcript profiling of potato tuber development

Høgh, A. L., Emmersen, J. & Nielsen, K. L., 2008.

Research output: Contribution to conference without publisher/journalPosterResearch

2007
8 Citations (Scopus)

Discarding duplicate ditags in LongSAGE analysis may introduce significant error

Emmersen, J., Høgh, A. L., Heidenblut, A., Hahn, S., Welinder, K. G. & Nielsen, K. L., 2007, In : BMC Bioinformatics. 8, 92

Research output: Contribution to journalJournal articleResearchpeer-review

Employing the new ultra-high-throughput sequencing technologies for the sequencing of full cDNAs from potato

Nielsen, K. L., Grauholm, J. & Emmersen, J., 2007.

Research output: Contribution to conference without publisher/journalPosterResearch

Microsatellites used for estimation of relationship between potato breeding clones

Kørup Sørensen, K., Kirk, H. G. & Emmersen, J., 2007.

Research output: Contribution to conference without publisher/journalPosterResearch

14 Citations (Scopus)

Separation of sequences from host-pathogen interface using triplet nucleotide frequencies

Emmersen, J., Rudd, S., Mewes, H. W. & Tetko, I., 2007, In : Fungal Genetics and Biology. 44, 4, p. 231-241 11 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Transcriptome Analysis of Potato Tuber Lifecycle

Petersen, A. H., Emmersen, J. & Nielsen, K. L., 2007.

Research output: Contribution to conference without publisher/journalPosterResearch

Transcriptome analysis of potato tuber life cycle

Høgh, A. L., Nielsen, K. L. & Emmersen, J., 2007.

Research output: Contribution to conference without publisher/journalPosterResearch

Transcript profiling of potato tuber development

Høgh, A. L., Emmersen, J. & Nielsen, K. L., 2007.

Research output: Contribution to conference without publisher/journalPosterResearch

A GLOBAL ANALYSIS OF THE HUMAN PANCREATIC TRANSCRIPTOME DEFINES A DISTINCT GENE EXPRESSION PROFILE IN DUCTAL CELLS

Merlos-Suárez, A., Heidenblut, A., Buchholz, M., Castellano, S., Emmersen, J., Gress, T., Hahn, S. & Real, F. X., 2006, (Submitted) In : Today in Medicine. Gastroenterology.

Research output: Contribution to journalJournal articleResearchpeer-review

89 Citations (Scopus)

DeepSAGE -digital transcriptomics with high sensitivity, simple experimental protocol and multiplexing of samples

Nielsen, K. L., Petersen, A. H. & Emmersen, J., 2006, In : Nucleic Acids Research. 34, 19

Research output: Contribution to journalJournal articleResearchpeer-review

Full Length Sequencing of cDNA - the experimental setup

Nielsen, H. V., Welinder, K. G. & Emmersen, J. M. G., 2006.

Research output: Contribution to conference without publisher/journalPosterResearch

Generating Unigene collections of EST sequences for use in MS identification

Emmersen, J., 2006, Mass Spectrometry Data Analysis in Proteomics: Methods in Molecular Biology. Matthiesen, R. (ed.). Totowa, N.J.: Humana Press, (Methods in Molecular Biology; No. 367).

Research output: Contribution to book/anthology/report/conference proceedingBook chapterResearch

58 Citations (Scopus)

Patatins, Kunitz protease inhibitors and other major proteins in tuber of potato cv. Kuras

Bauw, G., Nielsen, H. V., Emmersen, J., Nielsen, K. L., Jørgensen, M. R. & Welinder, K. G., 2006, In : FEBS Journal. 273, 15, p. 3569–3584 15 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Transcript Profiling during potato tuber development

Høgh, A. L., Emmersen, J. & Nielsen, K. L., 2006.

Research output: Contribution to conference without publisher/journalPosterResearch

2005

EST sequencing and proteomics of cassava

Emmersen, J. M. G., Høgh, A. L., Welinder, K. G. & Nielsen, K. L., 2005.

Research output: Contribution to conference without publisher/journalPosterResearch