Søren Michael Karst

Collaboration Partner, Department of Chemistry and Bioscience
Collaboration Partner, The Faculty of Engineering and Science
Collaboration Partner, Section of Biotechnology
Environmental Microbiology
Functional Genomics
Center for Microbial Communities

Phone4055 0188
Emailsmk@bio.aau.dk

Fredrik Bajers Vej 7, H, 3-401
9220 Aalborg
Denmark
Fredrik Bajers Vej 7H
9220 Aalborg
Denmark

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26 Journal article
23 Poster
14 Conference abstract for conference
2 Letter
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Generation of Comprehensive Ecosystem-Specific Reference Databases with Species-Level Resolution by High-Throughput Full-Length 16S rRNA Gene Sequencing and Automated Taxonomy Assignment (AutoTax)
Dueholm, M. S., Andersen, K. S., McIlroy, S. J., Kristensen, J. M., Yashiro, E., Karst, S. M., Albertsen, M. & Nielsen, P. H., 22 Sep 2020, In : mBio. 11, 5, p. 1-14 14 p., e01557-20.
Research output: Contribution to journal › Journal article › Research › peer-review

Open Access
File
29 Downloads (Pure)
Comprehensive ecosystem-specific 16S rRNA database illuminates the microbial dark matter in anaerobic digesters
Dueholm, M. S., Knutsson, S., Jørgensen, V. R., Nierychlo, M. A., Kristensen, J. M., Petriglieri, F., Yashiro, E., Karst, S. M., Albertsen, M. & Nielsen, P. H., 24 Jun 2019.
Research output: Contribution to conference without publisher/journal › Conference abstract for conference › Research
Comprehensive ecosystem-specific 16S rRNA gene databases with automated taxonomy assignment (AutoTax) provide species-level resolution in microbial ecology
Dueholm, M. S., Andersen, K. S., Petriglieri, F., McIlroy, S. J., Nierychlo, M. A., Petersen, J. F., Kristensen, J. M., Yashiro, E., Karst, S. M., Albertsen, M. & Nielsen, P. H., 2019, In : bioRxiv.
Research output: Contribution to journal › Journal article › Research
Extensive and High Quality Genome Recovery from full-scale WWTPs using Nanopore Sequencing
Singleton, C. M., Andersen, M. H., Kirkegaard, R. H., Kristensen, J. M., Yssing Michaelsen, T., Karst, S. M., Dueholm, M. S., Nielsen, P. H. & Albertsen, M., 18 Nov 2019.
Research output: Contribution to conference without publisher/journal › Poster › Research

File
58 Downloads (Pure)
Global genome‐centric metatranscriptomics unravels food webs in complex microbial communities
Yssing Michaelsen, T., Brandt, J., Karst, S. M., Kirkegaard, R. H. & Albertsen, M., 15 Jul 2019.
Research output: Contribution to conference without publisher/journal › Poster › Research › peer-review

Open Access
File

24 Downloads (Pure)

Bakterieopdagelse giver ny viden om Jordens kvælstofkredsløb
Søren Michael Karst
08/08/2015
1 item of Media coverage
Press/Media: Press / Media
Kom slamprøver i fryseren
Per Halkjær Nielsen, Mads Albertsen, Søren Michael Karst, Rasmus Hansen Kirkegaard & Marta Nierychlo
17/12/2014
1 item of Media coverage
Press/Media: Press / Media
Ny DNA-metode til analyse af bakterier giver helt nye muligheder
Per Halkjær Nielsen, Mads Albertsen, Søren Michael Karst, Rasmus Hansen Kirkegaard & Marta Nierychlo
17/12/2014
1 item of Media coverage
Press/Media: Press / Media
Eva Kammer Andresen
Eva Kammer Andresen & Søren Michael Karst
22/07/2011
3 items of Media coverage
Press/Media: Press / Media
Støtte til specialer
Jakob Stensgaard Diget, Eva Kammer Andresen, Terese Otte Andersen & Søren Michael Karst
07/07/2011
2 items of Media coverage
Press/Media: Press / Media