Søren Michael Karst

Emailsmkbio.aaudk

Research activity per year

If you made any changes in Pure these will be visible here soon.

Fingerprint

The fingerprint consists of automatically generated concepts related to the associated persons. It is updated automatically, when new content is added.

1 Similar Profiles

1 Active

Microflora Danica: The Microbiome of Denmark
Albertsen, M., Nielsen, P. H., Jensen, T. B. N., Sørensen, E. A., Sereika, M., Dottorini, G., Petriglieri, F., Jørgensen, V. R., Kirkegaard, R. H., Yang, Y., Karst, S. M., Giguere, A. T., Knutsson, S., Singleton, C. M., Dueholm, M. K. D. & Mølvang Dall, S.
Poul Due Jensen Foundation
01/01/2019 → 31/12/2025
Project: Research

33 Journal article
29 Poster
14 Conference abstract for conference
2 Letter
More

Enabling detection of ecological patterns in 10.000 samples representing the Danish soil microbiome
Nymann, T., Sørensen, E. A., Knutsson, S., Mølvang Dall, S., Jørgensen, V. R., Karst, S. M., Nielsen, P. H. & Albertsen, M., 18 Aug 2023.
Research output: Contribution to conference without publisher/journal › Poster › Communication

File
60 Downloads (Pure)
Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark
Michaelsen, T. Y., Bennedbæk, M., Christiansen, L. E., Jørgensen, M. S. F., Møller, C. H., Sørensen, E. A., Knutsson, S., Brandt, J., Jensen, T. B. N., Chiche-Lapierre, C., Collados, E. F., Sørensen, T., Petersen, C., Le-Quy, V., Sereika, M., Hansen, F. T., Rasmussen, M., Fonager, J., Karst, S. M., Marvig, R. L., & 70 othersStegger, M., Sieber, R. N., Skov, R., Legarth, R., Krause, T. G., Fomsgaard, A., The Danish COVID-19 Genome Consortium (DCGC), Andersen, K. S., Andersen, M. H., Berg, A., Bielidt, S. R., Dall, S. M., Dvarionaite, E., Hansen, S. H., Jørgensen, V. R., Kirkegaard, R. H., Saei, W., Nicolajsen, T. B., Østergaard, S. K., Brøndum, R. F., Bøgsted, M., Hose, K., Sagi, T., Pakanec, M., Fuglsang-Damgaard, D., Mølvadgaard, M., Krarup, H., Svarrer, C. W., Christiansen, M. T., Ingham, A. C., Johannesen, T. B., Basterrechea, M., Lilje, B., Ellegaard, K., Matusevicius, P., Christoffersen, L. B., Tang, M. H. E., Ng, K. L., Edslev, S. M., Baig, S., Larsen, O. H., Skipper, K. A., Vang, S., Handberg, K. J., Nielsen, M. T. K., Kobel, C. M., Andersen, C., Tarpgaard, I. H., Ellermann-Eriksen, S., Castruita, J. A. S., Schneider, U. V., Jacobsen, N. G., Andersen, C., Pedersen, M. S., Schønning, K., Kirkby, N., Nielsen, L., Nilsson, L. L., Friis, M. B., Sundelin, T., Hansen, T. A., Skov, M. N., Sydenham, T. V., Nielsen, X. C., Schouw, C. H., Jensen, A., Marmolin, E. S., Coia, J. E., Andersen, D. T. & Albertsen, M., 4 May 2022, In: Genome Medicine. 14, 1, 47.
Research output: Contribution to journal › Journal article › Research › peer-review

Open Access
File
3 Citations (Scopus)

11 Downloads (Pure)
Microflora Danica - The Microbiome of Denmark
Albertsen, M., Jørgensen, V. R., Nymann, T., Sørensen, E. A., Sereika, M., Mølvang Dall, S., Knutsson, S., Petriglieri, F., Dottorini, G., Singleton, C. M., Karst, S. M., Dueholm, M. K. D. & Nielsen, P. H., 14 Aug 2022.
Research output: Contribution to conference without publisher/journal › Poster › Research › peer-review
Microflora Danica - The Microbiome of Denmark
Nymann, T., Sørensen, E. A., Sereika, M., Jørgensen, V. R., Mølvang Dall, S., Knutsson, S., Petriglieri, F., Dottorini, G., Singleton, C. M., Karst, S. M., Dueholm, M. K. D., Nielsen, P. H. & Albertsen, M., 14 Nov 2022, p. P52.
Research output: Contribution to conference without publisher/journal › Poster › Research
Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing
Sereika, M., Kirkegaard, R. H., Karst, S. M., Yssing Michaelsen, T., Sørensen, E. A., Wollenberg, R. D. & Albertsen, M., 4 Jul 2022, In: Nature Methods. 19, 7, p. 823-826 4 p.
Research output: Contribution to journal › Journal article › Communication

Open Access
File
73 Citations (Scopus)

27 Downloads (Pure)

Additional file 2 of Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark
Michaelsen, T. Y. (Creator), Bennedbæk, M. (Creator), Christiansen, L. E. (Creator), Jørgensen, M. S. F. (Creator), Møller, C. H. (Creator), Sørensen, E. A. (Creator), Knutsson, S. (Creator), Brandt, J. (Creator), Jensen, T. B. N. (Creator), Chiche-Lapierre, C. (Creator), Collados, E. F. (Creator), Sørensen, T. (Creator), Petersen, C. (Creator), Le-Quy, V. (Creator), Sereika, M. (Creator), Hansen, F. T. (Creator), Rasmussen, M. (Creator), Fonager, J. (Creator), Karst, S. M. (Creator), Marvig, R. L. (Creator), Stegger, M. (Creator), Sieber, R. N. (Creator), Skov, R. (Creator), Legarth, R. (Creator), Krause, T. G. (Creator), Fomsgaard, A. (Creator) & Albertsen, M. (Creator), Figshare, 2022
DOI: 10.6084/m9.figshare.19703921.v1, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Introduction_and_transmission_of_SARS-CoV-2_lineage_B_1_1_7_Alpha_variant_in_Denmark/19703921/1
Dataset
Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark
Michaelsen, T. Y. (Creator), Bennedbæk, M. (Creator), Christiansen, L. E. (Creator), Jørgensen, M. S. F. (Creator), Møller, C. H. (Creator), Sørensen, E. A. (Creator), Knutsson, S. (Creator), Brandt, J. (Creator), Jensen, T. B. N. (Creator), Chiche-Lapierre, C. (Creator), Collados, E. F. (Creator), Sørensen, T. (Creator), Petersen, C. (Creator), Le-Quy, V. (Creator), Sereika, M. (Creator), Hansen, F. T. (Creator), Rasmussen, M. (Creator), Fonager, J. (Creator), Karst, S. M. (Creator), Marvig, R. L. (Creator), Stegger, M. (Creator), Sieber, R. N. (Creator), Skov, R. (Creator), Legarth, R. (Creator), Krause, T. G. (Creator), Fomsgaard, A. (Creator) & Albertsen, M. (Creator), Figshare, 2022
DOI: 10.6084/m9.figshare.c.5978621.v1, https://springernature.figshare.com/collections/Introduction_and_transmission_of_SARS-CoV-2_lineage_B_1_1_7_Alpha_variant_in_Denmark/5978621/1
Dataset

Bakterieopdagelse giver ny viden om Jordens kvælstofkredsløb
Søren Michael Karst
08/08/2015
1 item of Media coverage
Press/Media: Press / Media
Kom slamprøver i fryseren
Per Halkjær Nielsen, Mads Albertsen, Søren Michael Karst, Rasmus Hansen Kirkegaard & Marta Nierychlo
17/12/2014
1 item of Media coverage
Press/Media: Press / Media
Ny DNA-metode til analyse af bakterier giver helt nye muligheder
Per Halkjær Nielsen, Mads Albertsen, Søren Michael Karst, Rasmus Hansen Kirkegaard & Marta Nierychlo
17/12/2014
1 item of Media coverage
Press/Media: Press / Media
Eva Kammer Andresen
Eva Kammer Andresen & Søren Michael Karst
22/07/2011
3 items of Media coverage
Press/Media: Press / Media
Støtte til specialer
Jakob Stensgaard Diget, Eva Kammer Andresen, Terese Otte Andersen & Søren Michael Karst
07/07/2011
2 items of Media coverage
Press/Media: Press / Media

Søren Michael Karst

Fingerprint

Collaborations from the last five years

Dive into details

Microflora Danica: The Microbiome of Denmark

Enabling detection of ecological patterns in 10.000 samples representing the Danish soil microbiome

Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark

Microflora Danica - The Microbiome of Denmark

Microflora Danica - The Microbiome of Denmark

Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing

Additional file 2 of Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark

Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark

Bakterieopdagelse giver ny viden om Jordens kvælstofkredsløb

Kom slamprøver i fryseren

Ny DNA-metode til analyse af bakterier giver helt nye muligheder

Eva Kammer Andresen

Støtte til specialer

Søren Michael Karst

Fingerprint

Collaborations from the last five years

Projects

Research output

Datasets

Press/Media