Rasmus Hansen Kirkegaard

Phone5130 4709
Emailrhkbio.aaudk

Fredrik Bajers Vej 7, H, 3-401
9220 Aalborg
Denmark

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1 Similar Profiles

1 Finished
1 Active

Microflora Danica: The Microbiome of Denmark
Albertsen, M., Nielsen, P. H., Jensen, T. B. N., Sørensen, E. A., Sereika, M., Dottorini, G., Petriglieri, F., Jørgensen, V. R., Kirkegaard, R. H., Yang, Y., Karst, S. M., Giguere, A. T., Knutsson, S., Singleton, C. M., Dueholm, M. K. D. & Mølvang Dall, S.
Poul Due Jensen Foundation
01/01/2019 → 31/12/2025
Project: Research
Deciphering the role of microbial dark matter by novel DNA sequencing approaches
Albertsen, M., Karst, S. M., Kirkegaard, R. H. & Yssing Michaelsen, T.
Villum Fonden
01/01/2017 → 01/01/2022
Project: Research

31 Journal article
16 Poster
14 Conference abstract for conference
1 Book chapter
More

A RT-qPCR system using a degenerate probe for specific identification and differentiation of SARS-CoV-2 Omicron (B.1.1.529) variants of concern
Jessen, R., Nielsen, L., Larsen, N. B., Cohen, A. S., Gunalan, V., Marving, E., Alfaro-Núñez, A., Polacek, C., Fomsgaard, A., Spiess, K., The Danish COVID-19 Genome Consortium (DCGC), Andersen, K. S., Andersen, M. H., Berg, A., Bielidt, S. R., Dall, S. M., Dvarionaite, E., Hansen, S. H., Jørgensen, V. R., Kirkegaard, R. H., & 12 othersSaei, W., Nicolajsen, T. B., Østergaard, S. K., Brøndum, R. F., Bøgsted, M., Hose, K., Sagi, T., Pakanec, M., Fuglsang-Damgaard, D., Mølvadgaard, M., Krarup, H. & Nielsen, M. T. K., Oct 2022, In: PLOS ONE. 17, 10, 12 p., e0274889.
Research output: Contribution to journal › Journal article › Research › peer-review

Open Access
File
5 Citations (Scopus)

6 Downloads (Pure)
Disturbances in microbial skin recolonization and cutaneous immune response following allogeneic stem cell transfer
Bayer, N., Hausman, B., Pandey, R. V., Deckert, F., Gail, L. M., Strobl, J., Pjevac, P., Krall, C., Unterluggauer, L., Redl, A., Bachmayr, V., Kleissl, L., Nehr, M., Kirkegaard, R., Makristathis, A., Watzenboeck, M. L., Nica, R., Staud, C., Hammerl, L., Wohlfarth, P., & 5 othersEcker, R. C., Knapp, S., Rabitsch, W., Berry, D. & Stary, G., Nov 2022, In: Leukemia. 36, 11, p. 2705-2714 10 p.
Research output: Contribution to journal › Journal article › Research › peer-review
2 Citations (Scopus)
Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark
Michaelsen, T. Y., Bennedbæk, M., Christiansen, L. E., Jørgensen, M. S. F., Møller, C. H., Sørensen, E. A., Knutsson, S., Brandt, J., Jensen, T. B. N., Chiche-Lapierre, C., Collados, E. F., Sørensen, T., Petersen, C., Le-Quy, V., Sereika, M., Hansen, F. T., Rasmussen, M., Fonager, J., Karst, S. M., Marvig, R. L., & 70 othersStegger, M., Sieber, R. N., Skov, R., Legarth, R., Krause, T. G., Fomsgaard, A., The Danish COVID-19 Genome Consortium (DCGC), Andersen, K. S., Andersen, M. H., Berg, A., Bielidt, S. R., Dall, S. M., Dvarionaite, E., Hansen, S. H., Jørgensen, V. R., Kirkegaard, R. H., Saei, W., Nicolajsen, T. B., Østergaard, S. K., Brøndum, R. F., Bøgsted, M., Hose, K., Sagi, T., Pakanec, M., Fuglsang-Damgaard, D., Mølvadgaard, M., Krarup, H., Svarrer, C. W., Christiansen, M. T., Ingham, A. C., Johannesen, T. B., Basterrechea, M., Lilje, B., Ellegaard, K., Matusevicius, P., Christoffersen, L. B., Tang, M. H. E., Ng, K. L., Edslev, S. M., Baig, S., Larsen, O. H., Skipper, K. A., Vang, S., Handberg, K. J., Nielsen, M. T. K., Kobel, C. M., Andersen, C., Tarpgaard, I. H., Ellermann-Eriksen, S., Castruita, J. A. S., Schneider, U. V., Jacobsen, N. G., Andersen, C., Pedersen, M. S., Schønning, K., Kirkby, N., Nielsen, L., Nilsson, L. L., Friis, M. B., Sundelin, T., Hansen, T. A., Skov, M. N., Sydenham, T. V., Nielsen, X. C., Schouw, C. H., Jensen, A., Marmolin, E. S., Coia, J. E., Andersen, D. T. & Albertsen, M., 4 May 2022, In: Genome Medicine. 14, 1, 47.
Research output: Contribution to journal › Journal article › Research › peer-review

Open Access
File
3 Citations (Scopus)

12 Downloads (Pure)
Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing
Sereika, M., Kirkegaard, R. H., Karst, S. M., Yssing Michaelsen, T., Sørensen, E. A., Wollenberg, R. D. & Albertsen, M., 4 Jul 2022, In: Nature Methods. 19, 7, p. 823-826 4 p.
Research output: Contribution to journal › Journal article › Communication

Open Access
File
75 Citations (Scopus)

28 Downloads (Pure)
Assessing Illumina, Nanopore and PacBio sequencing platforms at recovering high quality genomes from complex microbial communities
Sereika, M., Kirkegaard, R. H., Sørensen, E. A., Karst, S. M., Yssing Michaelsen, T. & Albertsen, M., 15 Nov 2021.
Research output: Contribution to conference without publisher/journal › Poster › Communication

Open Access
File
31 Downloads (Pure)

Kirkegaard2017 - 16S rRNA gene amplicon survey of anaerobic digesters
Kirkegaard, R. H. (Creator), Figshare, 2017
DOI: 10.6084/m9.figshare.4308191, https://figshare.com/articles/Kirkegaard2017_-_16S_rRNA_gene_amplicon_survey_of_anaerobic_digesters/4308191
Dataset

Research Result of the Year in Denmark, videnskab.dk
Albertsen, Mads (Recipient), Nielsen, Per Halkjær (Recipient) & Kirkegaard, Rasmus Hansen (Recipient), 2015
Prize: Research, education and innovation prizes

1 Conference presentations

Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing
Rasmus Hansen Kirkegaard (Speaker)
16 Sept 2022
Activity: Talks and presentations › Conference presentations

Ph.d.-grad
Rasmus Hansen Kirkegaard
16/06/2017
1 item of Media coverage
Press/Media: Press / Media
Hidtil ukendt bakterieart fundet i biogasreaktorer
Rasmus Hansen Kirkegaard
25/05/2016
5 items of Media coverage
Press/Media: Press / Media
Tre AAU-forskere fik fornem pris
Per Halkjær Nielsen, Rasmus Hansen Kirkegaard & Mads Albertsen
04/05/2016
2 items of Media coverage
Press/Media: Press / Media
Årets Danske Forskningsresultat 2015 går til kvælstof-forskere
Mads Albertsen, Per Halkjær Nielsen & Rasmus Hansen Kirkegaard
25/04/2016
7 items of Media coverage
Press/Media: Press / Media
Forskningens Døgn er i gang
Rasmus Hansen Kirkegaard, Mads Albertsen & Per Halkjær Nielsen
25/04/2016
2 items of Media coverage
Press/Media: Press / Media

Rasmus Hansen Kirkegaard

Fingerprint

Collaborations from the last five years

Dive into details

Microflora Danica: The Microbiome of Denmark

Deciphering the role of microbial dark matter by novel DNA sequencing approaches

A RT-qPCR system using a degenerate probe for specific identification and differentiation of SARS-CoV-2 Omicron (B.1.1.529) variants of concern

Disturbances in microbial skin recolonization and cutaneous immune response following allogeneic stem cell transfer

Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark

Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing

Assessing Illumina, Nanopore and PacBio sequencing platforms at recovering high quality genomes from complex microbial communities

Kirkegaard2017 - 16S rRNA gene amplicon survey of anaerobic digesters

Research Result of the Year in Denmark, videnskab.dk

Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing

Ph.d.-grad

Hidtil ukendt bakterieart fundet i biogasreaktorer

Tre AAU-forskere fik fornem pris

Årets Danske Forskningsresultat 2015 går til kvælstof-forskere

Forskningens Døgn er i gang

Rasmus Hansen Kirkegaard

Fingerprint

Collaborations from the last five years

Projects

Research output

Datasets

Prizes

Activities

Press/Media