Shizuka Uchida

Research output

Research output per year 2005 2015 2016 2018 2019 2020 2022 2023

• 65 Journal article
• 36 Conference abstract in journal
• 19 Review article
• 8 Editorial
• 11 More
  • 4 Comment/debate
  • 2 Letter
  • 1 Book
  • 1 Book chapter
  • 1 Conference abstract for conference
  • 1 Paper without publisher/journal
  • 1 Other contribution

Research output per year

Research output per year

Search results

• 2019

  A novel macrophage subtype directs hematopoietic stem cell homing and retention

  Wysoczynski, M., Moore, J. B. & Uchida, S., Jul 2019, In: Annals of Translational Medicine. 7, Suppl 3, p. S79

  Research output: Contribution to journal › Journal article › Research › peer-review

• A step closer to improving cardiac homing of adipose-derived mesenchymal stem cells

  Leblanc, A. J. & Uchida, S., Feb 2019, In: American Journal of Physiology - Heart and Circulatory Physiology. 316, 2, p. H260-H261

  Research output: Contribution to journal › Comment/debate › Research › peer-review

  Open Access
  3 Citations (Scopus)

• Characterization of Cardiac Mesenchymal Cells From Non-Failing and Failing Hearts

  N, A. T., Andra, J., W, L. B., Wei, Z. Y., Lauren, H., Tyler, W., Shizuka, U., Marcin, W. & P, J. S., Jul 2019, In: Circulation. 140, Suppl_1, p. A15986-A15986 1 p.

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

• Circular RNAs as diagnostic tool for renal transplant patients with acute rejection

  Moore, J. B., Merchant, M. L. & Uchida, S., Dec 2019, In: Annals of Translational Medicine. 7, Suppl 8, p. S302

  Research output: Contribution to journal › Journal article › Research › peer-review

• E2f1 deletion attenuates infarct-induced ventricular remodeling without affecting O-GlcNAcylation

  Dassanayaka, S., Brittian, K. R., Jurkovic, A., Higgins, L. A., Audam, T. N., Long, B. W., Harrison, L. T., Militello, G., Riggs, D. W., Chitre, M. G., Uchida, S., Muthusamy, S., Gumpert, A. M. & Jones, S. P., 1 Jul 2019, In: Basic Research in Cardiology. 114, 4, 28.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • E2F1 100%
  • Myocardial Infarction 54%
  • Heart Infarction 54%
  • Transferase 45%
  • Heart Ventricle Remodeling 36%
  22 Citations (Scopus)

• Ectopic Cardiogenic Transcription Factor Expression Augments the Anti‐fibrogenic Activity of Administered Cardiac Mesenchymal Stromal Cells in a Model of Chronic Ischemic Cardiomyopathy

  Heidel, J. S., Fischer, A. G., Sadri, G., Tang, X. L., Wu, W. J., Uchida, S., Stowers, H., Bolli, R. & Moore, J. B., 1 Apr 2019, In: The FASEB Journal. 33, S1, p. lb476-lb476

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  • Mesenchymal Stem Cell 100%
  • Stromal Cell 100%
  • Green Fluorescent Protein 80%
  • In Vitro 60%
  • Cytokine 60%

• Epigenetically modified cardiac mesenchymal stromal cells limit myocardial fibrosis and promote functional recovery in a model of chronic ischemic cardiomyopathy

  Moore, J. B., Tang, X. L., Zhao, J., Fischer, A. G., Wu, W. J., Uchida, S., Gumpert, A. M., Stowers, H., Wysoczynski, M. & Bolli, R., 1 Jan 2019, In: Basic Research in Cardiology. 114, 1, 3.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Cells 100%
  • Entinostat 66%
  • HDAC1 50%
  • Myocyte 50%
  • Cardiac Fibrosis 33%
  40 Citations (Scopus)

• Hematopoietic deficiency of the long noncoding RNA malat1 promotes atherosclerosis and plaque inflammation

  Cremer, S., Michalik, K. M., Fischer, A., Pfisterer, L., Jaé, N., Winter, C., Boon, R. A., Muhly-Reinholz, M., John, D., Uchida, S., Weber, C., Poller, W., Günther, S., Braun, T., Li, D. Y., Maegdefessel, L., Perisic Matic, L., Hedin, U., Soehnlein, O., Zeiher, A., & 1 othersDimmeler, S., 5 Mar 2019, In: Circulation. 139, 10, p. 1320-1334 15 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Metastatic Carcinoma 100%
  • Lung Adenocarcinoma 100%
  • Mouse 100%
  • Lung 100%
  • Metastasis 100%
  133 Citations (Scopus)

• High Fat, High Sucrose Diet Alters Hyaluronan Metabolism in Fibroblasts and Promotes Ventricular Dilatation

  Wei, Z. Y., Kenneth, B., Andrea, J., Tyler, W., Shizuka, U., A, N. M., P, J. S., Robert, B. & Sujith, D., 2019, In: Circulation. 140, Suppl_1, p. A17228-A17228 1 p.

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

• Investigation of RNA editing sites within bound regions of RNA-binding proteins

  Weirick, T., Militello, G., Hosen, M. R., John, D., Moore, J. B. & Uchida, S., Dec 2019, In: High-Throughput. 8, 4, 19.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • RNA Editing 100%
  • RNA-Binding Protein 66%
  • RNA 33%
  • RNA-binding Protein 33%
  • Adenosine 25%
  2 Citations (Scopus)

• Long Noncoding RNA Tykril Plays a Role in Pulmonary Hypertension by Controlling the p53 Mediated Regulation of PDGFRβ

  M, Z. C., Chanil, V., Serge, T., Astrid, W., Jes-Niels, B., C, B. F., David, J., Tyler, W., Simone-Franziska, G., Oliver, R., Nicolas, J., Shemsi, D., Regina, H., Karl-Friedrich, K., Christian, M., M, M. K., Wei, C., Werner, S., Shizuka, U., M, Z. A., & 2 othersStefanie, D. & Soni, P., 2019, In: Circulation. 140, Suppl_1, p. A14368-A14368 1 p.

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

• Physiological roles of non-coding RNAs

  Uchida, S. & Adams, J. C., 2019, In: American Journal of Physiology - Cell Physiology. 317, 1, p. C1-C2

  Research output: Contribution to journal › Editorial › peer-review

  Open Access
  18 Citations (Scopus)
• 2018

  Airn regulates IGF2BP2 translation in cardiomyocytes

  Hosen, M. R., Militello, G., Weirick, T., Ponomareva, Y., Dassanayaka, S., Moore, J. B., Döring, C., Wysoczynski, M., Jones, S. P., Dimmeler, S. & Uchida, S., May 2018, In: Circulation Research. 122, 10, p. 1347-1353 7 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Messenger RNA 100%
  • Protein Binding 100%
  • Somatomedin B 100%
  • Binding Protein 100%
  • Insulin-Like Growth Factor 2 100%
  23 Citations (Scopus)

• A novel long non-coding RNA Myolinc regulates myogenesis through TDP-43 and Filip1

  Militello, G., Hosen, M. R., Ponomareva, Y., Gellert, P., Weirick, T., John, D., Hindi, S. M., Mamchaoui, K., Mouly, V., Döring, C., Zhang, L., Nakamura, M., Kumar, A., Fukada, S. I., Dimmeler, S. & Uchida, S., 1 Apr 2018, In: Journal of Molecular Cell Biology. 10, 2, p. 102-117 16 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Muscle 100%
  • Long Untranslated RNA 83%
  • TAR DNA Binding Protein 83%
  • Long Non-Coding RNA 83%
  • Muscle Development 66%
  44 Citations (Scopus)

• A systems immunology approach identifies the collective impact of 5 miRs in Th2 inflammation

  Kılıç, A., Santolini, M., Nakano, T., Schiller, M., Teranishi, M., Gellert, P., Ponomareva, Y., Braun, T., Uchida, S., Weiss, S. T., Sharma, A. & Renz, H., 7 Jun 2018, In: JCI Insight. 3, 11

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • microRNA 100%
  • MicroRNA 100%
  • T Helper 2 Cell 57%
  • Immune Response 28%
  • CD4 28%
  8 Citations (Scopus)

• DRETools: A tool-suite for differential RNA editing detection [version 2; peer review: 1 approved, 1 approved with reservations, 1 not approved]

  Weirick, T., Trainor, P., Rouchka, E., Defilippis, A. & Uchida, S., 19 Sep 2018, In: F1000Research. 7, 1366.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • RNA Editing 100%
  • Epitranscriptomics 12%
  • Comprehension 12%
  • Sample 12%
  • Diseases 12%

• Increasing workflow development speed and reproducibility with Vectools [version 2; peer review: 2 approved]

  Weirick, T., Müller, R. & Uchida, S., 18 Oct 2018, In: F1000Research. 7, 11 p., 1499.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Reproducibility 100%
  • Workflows 100%
  • Functions 66%
  • Vectors 66%
  • Velocity 66%

• Logic programming to infer complex RNA expression patterns from RNA-seq data

  Weirick, T., Militello, G., Ponomareva, Y., John, D., Döring, C., Dimmeler, S. & Uchida, S., 1 Mar 2018, In: Briefings in Bioinformatics. 19, 2, p. 199-209 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Databases 100%
  • Cells 100%
  • Data Base 100%
  • Logic Programming 100%
  • RNA 66%
  11 Citations (Scopus)

• Long Non-coding RNAs in Endothelial Biology

  Weirick, T., Militello, G. & Uchida, S., 2018, In: Frontiers in Physiology. 9, p. 522

  Research output: Contribution to journal › Review article › peer-review

  • RNA 100%
  • Organisms 50%
  • Long Non-Coding RNA 50%
  • Long Untranslated RNA 50%
  • Organism 50%
  22 Citations (Scopus)

• Maximizing the information extraction of RNA-seq data for achieving personalized medicine

  Uchida, S. & Weirick, T., 2018, In: Human Genomics. 12, Suppl. 1, p. 1-1 1 p., A2.

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  Open Access

• Modelling human heart muscle development in bioengineered heart muscle

  Raad, F. S., Hudson, J., Tiburcy, M., Roa, A., Uchida, S. & Zimmermann, W. H., 2018, In: Naunyn-Schmiedeberg's Archives of Pharmacology. 391, Suppl. 1, p. S31-S31 1 p.

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

• RNA editing unexplored opportunities in the cardiovascular system

  Uchida, S. & Jones, S. P., 2 Feb 2018, In: Circulation Research. 122, 3, p. 399-401 3 p.

  Research output: Contribution to journal › Letter › peer-review

  • RNA Editing 100%
  • RNA 50%
  • Pipeline 25%
  • RNA Sequencing 25%
  • Cardiovascular 25%
  18 Citations (Scopus)

• Short and Long Noncoding RNAs Regulate the Epigenetic Status of Cells

  Uchida, S. & Bolli, R., 20 Sep 2018, In: Antioxidants and Redox Signaling. 29, 9, p. 832-845 14 p.

  Research output: Contribution to journal › Review article › peer-review

  • Untranslated RNA 100%
  • Non-Coding RNA 100%
  • Epigenomics 71%
  • Epigenetics 71%
  • Protein 42%
  10 Citations (Scopus)

• TAK1 regulates skeletal muscle mass and mitochondrial function

  Hindi, S. M., Sato, S., Xiong, G., Bohnert, K. R., Gibb, A. A., Gallot, Y. S., McMillan, J. D., Hill, B. G., Uchida, S. & Kumar, A., 8 Feb 2018, In: JCI Insight. 3, 3

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Kinase 100%
  • Phosphotransferase 100%
  • Skeletal Muscle 63%
  • Mouse 27%
  • Adult 27%
  30 Citations (Scopus)
• 2017

  Besides imprinting: Meg3 regulates cardiac remodeling in cardiac hypertrophy

  Uchida, S., 1 Aug 2017, In: Circulation Research. 121, 5, p. 486-487 2 p.

  Research output: Contribution to journal › Editorial › peer-review
  7 Citations (Scopus)

• Exercise-Induced Changes in Glucose Metabolism Promote Physiological Cardiac Growth

  Gibb, A. A., Epstein, P. N., Uchida, S., Zheng, Y., McNally, L. A., Obal, D., Katragadda, K., Trainor, P., Conklin, D. J., Brittian, K. R., Tseng, M. T., Wang, J., Jones, S. P., Bhatnagar, A. & Hill, B. G., 28 Nov 2017, In: Circulation. 136, 22, p. 2144-2157 14 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Exercise 100%
  • Heart 85%
  • Growth 71%
  • Mouse 71%
  • 6 Phosphofructokinase 57%
  73 Citations (Scopus)

• High-Throughput Methods to Detect Long Non-Coding RNAs

  Uchida, S., 31 Aug 2017, In: High-Throughput. 6, 3

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Long Non-Coding RNA 100%
  • Long Untranslated RNA 100%
  • Microarrays 83%
  • RNA Sequence 50%
  • RNA 50%

• Identification and Functional Characterization of Hypoxia-Induced Endoplasmic Reticulum Stress Regulating lncRNA (HypERlnc) in Pericytes

  Bischoff, F. C., Werner, A., John, D., Boeckel, J. N., Melissari, M. T., Grote, P., Glaser, S. F., Demolli, S., Uchida, S., Michalik, K. M., Meder, B., Katus, H. A., Haas, J., Chen, W., Pullamsetti, S. S., Seeger, W., Zeiher, A. M., Dimmeler, S. & Zehendner, C. M., 4 Aug 2017, In: Circulation Research. 121, 4, p. 368-375 8 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Endoplasmic Reticulum Stress 100%
  • Long Untranslated RNA 94%
  • Hypoxia 88%
  • Long Non-Coding RNA 76%
  • Pericyte 70%
  40 Citations (Scopus)

• Long Noncoding RNA MANTIS Facilitates Endothelial Angiogenic Function

  Leisegang, M. S., Fork, C., Josipovic, I., Richter, F. M., Preussner, J., Hu, J., Miller, M. J., Epah, J., Hofmann, P., Günther, S., Moll, F., Valasarajan, C., Heidler, J., Ponomareva, Y., Freiman, T. M., Maegdefessel, L., Plate, K. H., Mittelbronn, M., Uchida, S., Künne, C., & 11 othersStellos, K., Schermuly, R. T., Weissmann, N., Devraj, K., Wittig, I., Boon, R. A., Dimmeler, S., Pullamsetti, S. S., Looso, M., Miller, F. J. & Brandes, R. P., 4 Jul 2017, In: Circulation. 136, 1, p. 65-79 15 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Long Untranslated RNA 100%
  • Long Noncoding RNA 55%
  • Endothelial Cell 33%
  • Cells 33%
  • Immunoprecipitation 22%
  156 Citations (Scopus)

• Resolving the problem of multiple accessions of the same transcript deposited across various public databases

  Weirick, T., John, D. & Uchida, S., 2017, In: Briefings in Bioinformatics. 18, 2, p. 226-235 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Annotation 100%
  • Data Base 71%
  • References 28%
  • Algorithm 28%
  • Algorithms 14%
  6 Citations (Scopus)

• RNAEditor: Easy detection of RNA editing events and the introduction of editing islands

  John, D., Weirick, T., Dimmeler, S. & Uchida, S., 1 Nov 2017, In: Briefings in Bioinformatics. 18, 6, p. 993-1001 9 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Events 100%
  • RNA Editing 71%
  • Detection 28%
  • RNA Sequence 28%
  • Inosine 28%
  46 Citations (Scopus)

• Screening and validation of lncRNAs and circRNAs as miRNA sponges

  Militello, G., Weirick, T., John, D., Döring, C., Dimmeler, S. & Uchida, S., 1 Sep 2017, In: Briefings in Bioinformatics. 18, 5, p. 780-788 9 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • microRNA 100%
  • MicroRNA 100%
  • RNA 55%
  • Long Untranslated RNA 55%
  • Biological Product 33%
  256 Citations (Scopus)
• 2016

  Adenosine-to-inosine RNA editing controls cathepsin S expression in atherosclerosis by enabling HuR-mediated post-transcriptional regulation

  Stellos, K., Gatsiou, A., Stamatelopoulos, K., Perisic Matic, L., John, D., Lunella, F. F., Jaé, N., Rossbach, O., Amrhein, C., Sigala, F., Boon, R. A., Fürtig, B., Manavski, Y., You, X., Uchida, S., Keller, T., Boeckel, J. N., Franco-Cereceda, A., Maegdefessel, L., Chen, W., & 6 othersSchwalbe, H., Bindereif, A., Eriksson, P., Hedin, U., Zeiher, A. M. & Dimmeler, S., 1 Oct 2016, In: Nature Medicine. 22, 10, p. 1140-1150 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Cathepsin S 100%
  • Messenger RNA 77%
  • RNA Editing 77%
  • Vascular Disease 33%
  • Adenosine 33%
  165 Citations (Scopus)

• ANGIOGENES: Knowledge database for protein-coding and noncoding RNA genes in endothelial cells

  Müller, R., Weirick, T., John, D., Militello, G., Chen, W., Dimmeler, S. & Uchida, S., 1 Sep 2016, In: Scientific Reports. 6, 32475.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Long Untranslated RNA 100%
  • Long Noncoding RNA 100%
  • Protein 83%
  • Coding 83%
  • Cytochromes 83%
  21 Citations (Scopus)

• Computational detection of stage-specific transcription factor clusters during heart development

  Zeidler, S., Meckbach, C., Tacke, R., Raad, F. S., Roa, A., Uchida, S., Zimmermann, W. H., Wingender, E. & Gültas, M., 23 Mar 2016, In: Frontiers in Genetics. 7, MAR, 33.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Transcription Factor 100%
  • Transcription Factors 100%
  • Binding Site 61%
  • Gene 30%
  • Nested Gene 30%
  11 Citations (Scopus)

• Long-Non-Coding RNA HypERrlnc Regulates Human Pericyte Function by Modulation of the Endoplasmic Reticulum-Stress Cell Response

  Florian, B., Astrid, W., Jes-Niels, B., Shemsi, D., Katharina, M., Benjamin, M., A, K. H., Jan, H., Wei, C., David, J., Shizuka, U., M, Z. A., Stefanie, D. & M, Z. C., 2016, In: Circulation. 134, Suppl_1, p. A15078-A15078

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

• Long Non-coding RNA TYKRIL Regulates Pericyte Survival in the Cardiovascular and Central Nervous System in vivo in a p53 Dependent Manner

  M, Z. C., C, T. S., Astrid, W., Jes-Niels, B., Florian, B., David, J., Tyler, W., Nicolas, J., Shemsi, D., Regina, H., Katharina, M., Benjamin, M., A, K. H., Jan, H., Wei, C., Shizuka, U., M, Z. A. & Stefanie, D., 2016, In: Circulation. 134, Suppl_1, p. A16105-A16105

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

• Mesenchymal stem cells attenuate inflammatory processes in the heart and lung via inhibition of TNF signaling

  Martire, A., Bedada, F. B., Uchida, S., Pöling, J., Krüger, M., Warnecke, H., Richter, M., Kubin, T., Herold, S. & Braun, T., 1 Sep 2016, In: Basic Research in Cardiology. 111, 5, 54.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Mesenchymal Stem Cell 100%
  • Tumor Necrosis Factor 90%
  • Serositis 40%
  • Inflammation 40%
  • Tissues 30%
  37 Citations (Scopus)

• Role of Adenosine-to-Inosine RNA Editing of Alu Elements in Human Vascular Inflammatory Diseases

  Konstantinos, S., Aikaterini, G., Kimon, S., Ljubica, P., David, J., F, L. F., Nicolas, J., Oliver, R., Carolin, A., Frangiska, S., A, B. R., Boris, F., Yosif, M., Xintian, Y., Shizuka, U., Till, K., Jes-Niels, B., Anders, F-C., Lars, M., Wei, C., & 6 othersHarald, S., Albrecht, B., Per, E., Ulf, H., M, Z. A. & Stefanie, D., 2016, In: Arteriosclerosis, Thrombosis, and Vascular Biology. 36, suppl_1, p. A19-A19

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

• Specific phenotype and function of CD56-expressing innate immune cell subsets in human thymus

  Gerstner, S., Köhler, W., Heidkamp, G., Purbojo, A., Uchida, S., Ekici, A. B., Heger, L., Luetke-Eversloh, M., Schubert, R., Bade, P., Klingebiel, T., Koehl, U., Mackensen, A., Romagnani, C., Cesnjevar, R., Dudziak, D. & Ullrich, E., Dec 2016, In: Journal of Leukocyte Biology. 100, 6, p. 1297-1310 14 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Cells 100%
  • Natural Killer Cell 37%
  • Cytotoxicity 25%
  • Immunocompetent Cell 25%
  • NKG2D 25%
  2 Citations (Scopus)

• The Antisense Transcript of GATA6 Interacts With the H3K4me3 Deaminase LOXL2 and Epigenetically Regulates Endothelial Gene Expression

  Nicolas, J., Philipp, N., David, J., Shizuka, U., Marcus, K. & Stefanie, D., 2016, In: Circulation. 134, Suppl_1, p. A14714-A14714 1 p.

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

• The Hypoxia-induced Long Non-coding RNA Hyp_up_3 Regulates Alternative Splicing and Controls Angiogenesis of Endothelial Cells

  Philipp, N., Youssef, F., Nicolas, J., Andrea, K., David, J., Shizuka, U., Juliana, H., Ilka, W. & Stefanie, D., 2016, In: Circulation. 134, Suppl_1, p. A15654-A15654 1 p.

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

• The identification and characterization of novel transcripts from RNA-seq data

  Weirick, T., Militello, G., Müller, R., John, D., Dimmeler, S. & Uchida, S., 1 Jul 2016, In: Briefings in Bioinformatics. 17, 4, p. 678-685 8 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Sequencing 100%
  • Next Generation Sequencing 75%
  • RNA Sequence 62%
  • RNA 37%
  • Analysis 37%
  22 Citations (Scopus)
• 2015

  Characterization of Hypoxia-induced Long Non-coding RNAs in Endothelial Cells

  Philipp, N., Nicolas, J., David, J., Shizuka, U., Marcus, K. & Stefanie, D., 2015, In: Circulation. 132, Suppl_3, p. A15235-A15235

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

• C-It-Loci: A knowledge database for tissue-enriched loci

  Weirick, T., John, D., Dimmeler, S. & Uchida, S., 18 Dec 2015, In: Bioinformatics. 31, 21, p. 3537-3543 7 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Tissues 100%
  • Protein 83%
  • Untranslated RNA 83%
  • Non-Coding RNA 83%
  • Gene 50%
  25 Citations (Scopus)

• Doublecortin marks a new population of transiently amplifying muscle progenitor cells and is required for myofiber maturation during skeletal muscle regeneration

  Ogawa, R., Ma, Y., Yamaguchi, M., Ito, T., Watanabe, Y., Ohtani, T., Murakami, S., Uchida, S., De Gaspari, P., Uezumi, A., Nakamura, M., Miyagoe-Suzuki, Y., Tsujikawa, K., Hashimoto, N., Braun, T., Tanaka, T., Takeda, SI., Yamamoto, H. & Fukada, S. I., 1 Jan 2015, In: Development (Cambridge). 142, 1, p. 51-61 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Maturation 100%
  • Myoblast 80%
  • Cells 80%
  • MyoD 80%
  • Muscle Regeneration 60%
  24 Citations (Scopus)

• Epigenetic regulation of angiogenesis by JARID1B-induced repression of HOXA5

  Fork, C., Gu, L., Hitzel, J., Josipovic, I., Hu, J., Wong, M. S., Ponomareva, Y., Albert, M., Schmitz, S. U., Uchida, S., Fleming, I., Helin, K., Steinhilber, D., Leisegang, M. S. & Brandes, R. P., 27 Jul 2015, In: Arteriosclerosis, Thrombosis, and Vascular Biology. 35, 7, p. 1645-1652 8 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • JARID1B 100%
  • Angiogenesis 30%
  • Human Umbilical Vein Endothelial Cell 30%
  • Chromatin 20%
  • Lysozyme 20%
  27 Citations (Scopus)

• Exercise controls non-coding RNAs

  Uchida, S. & Dimmeler, S., 7 Apr 2015, In: Cell Metabolism. 21, 4, p. 511-512 2 p.

  Research output: Contribution to journal › Editorial › peer-review

  Open Access

  • Exercise 100%
  • Heart 66%
  • Cardiovascular System 66%
  • Growth 33%
  • microRNA 33%
  8 Citations (Scopus)

• Hypoxia Regulated Circular RNAs Control Endothelial Cell Functions (Best of Basic Science Abstract)

  W, H. A., Jes-Niels, B., Nicolas, J., Yuliya, P., Wei, C., A, B. R., David, J., M, Z. A., Shizuka, U. & Stefanie, D., 2015, In: Circulation. 132, Suppl_3, p. A19222-A19222

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

• Identification and Characterization of Hypoxia-Regulated Endothelial Circular RNA

  Boeckel, J. N., Jaé, N., Heumüller, A. W., Chen, W., Boon, R. A., Stellos, K., Zeiher, A. M., John, D., Uchida, S. & Dimmeler, S., 23 Oct 2015, In: Circulation Research. 117, 10, p. 884-890 7 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • RNA 100%
  • Circular RNA 84%
  • Cells 30%
  • Hypoxia 23%
  • MicroRNA 15%
  267 Citations (Scopus)