Projects per year
Personal profile
Research profile
Microbial life is everywhere impacting everything from planetary processes to human health. Understanding the microbial communities driving these processes are vital for reaching a sustainable future, yet most bacteria are still to be discovered, known as the microbial dark matter.
I focus on analyzing bacterial communities with metagenomics and machine learning to improve human health and illuminate the microbial dark matter by improving the recovery of bacterial genomes.
Education/Academic qualification
Biotechnology, MASTER OF SCIENCE (MSC) IN ENGINEERING, The Importance of Taxonomic Classification Software and Machine Learning Algorithms for the Prediction of Colorectal Cancer, Center for Microbial Communities
1 Sept 2019 → 25 Oct 2021
Award Date: 25 Oct 2021
Biotechnology, BACHELOR OF SCIENCE (BSC) IN ENGINEERING, Cyclodextringlycosyltransferase Catalysed Transglycosylation of Alkylglycosides, Department of Chemistry and Bioscience
1 Sept 2016 → 21 Jun 2019
Award Date: 21 Jun 2019
Keywords
- Chemistry and Bioscience
- DNA sequencing
- Metagenomics
- Bacteria
- Colorectal Cancer
- Oxford Nanopore
- Illumina
- Public Health
- Diagnostics
- SARS-CoV-2 sequencing
- Machine Learning
- High-performance computing
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Collaborations from the last five years
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Projects
- 2 Active
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Data Science meets Microbial Dark Matter
Albertsen, M., Hose, K., Nielsen, T. D., Lamurias, A. & Mølvang Dall, S.
Villum Fonden, Danish E-infrastructure Cooperation
01/01/2021 → 31/12/2023
Project: Research
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Microflora Danica: The Microbiome of Denmark
Albertsen, M., Nielsen, P. H., Jensen, T. B. N., Sørensen, E. A., Sereika, M., Dottorini, G., Petriglieri, F., Jørgensen, V. R., Kirkegaard, R. H., Yang, Y., Karst, S. M., Giguere, A. T., Knutsson, S., Singleton, C. M., Dueholm, M. K. D. & Mølvang Dall, S.
01/01/2019 → 31/12/2025
Project: Research
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The Importance of Taxonomic Classification Software and Machine Learning Algorithms for the Prediction of Colorectal Cancer
Mølvang Dall, S., Yssing Michaelsen, T. & Albertsen, M., 15 Nov 2021.Research output: Contribution to conference without publisher/journal › Poster › Research
Open AccessFile4 Downloads (Pure) -
Enabling detection of ecological patterns in 10.000 samples representing the Danish soil microbiome
Nymann, T., Sørensen, E. A., Knutsson, S., Mølvang Dall, S., Jørgensen, V. R., Karst, S. M., Nielsen, P. H. & Albertsen, M., 18 Aug 2023.Research output: Contribution to conference without publisher/journal › Poster › Communication
File63 Downloads (Pure) -
A RT-qPCR system using a degenerate probe for specific identification and differentiation of SARS-CoV-2 Omicron (B.1.1.529) variants of concern
Jessen, R., Nielsen, L., Larsen, N. B., Cohen, A. S., Gunalan, V., Marving, E., Alfaro-Núñez, A., Polacek, C., Fomsgaard, A., Spiess, K., The Danish COVID-19 Genome Consortium (DCGC), Andersen, K. S., Andersen, M. H., Berg, A., Bielidt, S. R., Dall, S. M., Dvarionaite, E., Hansen, S. H., Jørgensen, V. R., Kirkegaard, R. H., & 12 others, Oct 2022, In: PLOS ONE. 17, 10, 12 p., e0274889.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile5 Citations (Scopus)5 Downloads (Pure) -
Microflora Danica - The Microbiome of Denmark
Nymann, T., Sørensen, E. A., Sereika, M., Jørgensen, V. R., Mølvang Dall, S., Knutsson, S., Petriglieri, F., Dottorini, G., Singleton, C. M., Karst, S. M., Dueholm, M. K. D., Nielsen, P. H. & Albertsen, M., 14 Nov 2022, p. P52.Research output: Contribution to conference without publisher/journal › Poster › Research
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Microflora Danica - The Microbiome of Denmark
Albertsen, M., Jørgensen, V. R., Nymann, T., Sørensen, E. A., Sereika, M., Mølvang Dall, S., Knutsson, S., Petriglieri, F., Dottorini, G., Singleton, C. M., Karst, S. M., Dueholm, M. K. D. & Nielsen, P. H., 14 Aug 2022.Research output: Contribution to conference without publisher/journal › Poster › Research › peer-review