Projects per year
Personal profile
Research profile
Microbial life is everywhere impacting everything from planetary processes to human health. Understanding the microbial communities driving these processes are vital for reaching a sustainable future, yet most bacteria are still to be discovered, known as the microbial dark matter.
I focus on analyzing bacterial communities with metagenomics and machine learning to improve human health and illuminate the microbial dark matter by improving the recovery of bacterial genomes.
Education/Academic qualification
Biotechnology, MASTER OF SCIENCE (MSC) IN ENGINEERING, The Importance of Taxonomic Classification Software and Machine Learning Algorithms for the Prediction of Colorectal Cancer, Center for Microbial Communities
1 Sept 2019 → 25 Oct 2021
Award Date: 25 Oct 2021
Biotechnology, BACHELOR OF SCIENCE (BSC) IN ENGINEERING, Cyclodextringlycosyltransferase Catalysed Transglycosylation of Alkylglycosides, Department of Chemistry and Bioscience
1 Sept 2016 → 21 Jun 2019
Award Date: 21 Jun 2019
Keywords
- Chemistry and Bioscience
- DNA sequencing
- Metagenomics
- Bacteria
- Colorectal Cancer
- Oxford Nanopore
- Illumina
- Public Health
- Diagnostics
- SARS-CoV-2 sequencing
- Machine Learning
- High-performance computing
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Collaborations from the last five years
Dive into details by clicking on the dots.
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Data Science meets Microbial Dark Matter
Albertsen, M. (PI), Hose, K. (PI), Nielsen, T. D. (PI), Lamurias, A. (Project Participant) & Mølvang Dall, S. (Project Participant)
Danish E-infrastructure Cooperation, Villum Foundation
01/01/2021 → 31/12/2023
Project: Research
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Microflora Danica: The Microbiome of Denmark
Albertsen, M. (PI), Nielsen, P. H. (PI), Jensen, T. B. N. (Project Participant), Sørensen, E. A. (Project Participant), Sereika, M. (Project Participant), Dottorini, G. (Project Participant), Petriglieri, F. (Project Participant), Jørgensen, V. R. (Project Participant), Kirkegaard, R. H. (Project Participant), Yang, Y. (Project Participant), Karst, S. M. (Project Participant), Giguere, A. T. (Project Participant), Knutsson, S. (Project Participant), Singleton, C. M. (Project Participant), Dueholm, M. K. D. (Project Participant), Mølvang Dall, S. (Project Participant), Kristensen, J. M. (Project Participant) & Delogu, F. (Project Participant)
01/01/2019 → 31/12/2025
Project: Research
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The Importance of Taxonomic Classification Software and Machine Learning Algorithms for the Prediction of Colorectal Cancer
Mølvang Dall, S., Yssing Michaelsen, T. & Albertsen, M., 15 Nov 2021.Research output: Contribution to conference without publisher/journal › Poster › Research
Open AccessFile15 Downloads (Pure) -
High-throughput DNA extraction and cost-effective miniaturized metagenome and amplicon library preparation of soil samples for DNA sequencing
Jensen, T. B. N., Dall, S. M., Knutsson, S., Karst, S. M. & Albertsen, M., Apr 2024, In: PLOS ONE. 19, 4, e0301446.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile1 Citation (Scopus) -
Microflora Danica: the atlas of Danish environmental microbiomes
The Microflora Danica Consortium, 27 Jun 2024, bioRxiv, 57 p.Research output: Working paper/Preprint › Preprint
Open AccessFile -
The effect of non-pooled multi-donor faecal microbiota transplantation for inducing clinical remission in patients with chronic pouchitis: Results from a multicentre randomised double-blinded placebo-controlled trial (MicroPouch)
Kousgaard, S. J., Cold, F., Halkjær, S. I., Petersen, A. M., Kjeldsen, J., Møller Hansen, J., Dall, S. M., Albertsen, M., Nielsen, H. L., Kirk, K. F., Duch, K., Sønderkær, M. & Thorlacius-Ussing, O., 1 Nov 2024, In: Journal of Crohn's and Colitis. 18, 11, p. 1753-1766 14 p., jjae066.Research output: Contribution to journal › Journal article › Research › peer-review
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Enabling detection of ecological patterns in 10.000 samples representing the Danish soil microbiome
Albertsen, M., Nymann, T., Jørgensen, V. R., Sørensen, E. A., Mølvang Dall, S., Karst, S. M., Knutsson, S. & Nielsen, P. H., 18 Aug 2023.Research output: Contribution to conference without publisher/journal › Poster › Communication
File117 Downloads (Pure)