Identification of three new splice variants of the SNARE protein SNAP-23

A Shukla, T J Corydon, Søren Nielsen, H J Hoffmann, R Dahl

Research output: Contribution to journalJournal articleResearchpeer-review

7 Citations (Scopus)

Abstract

SNAP-23 has an important role in protein-trafficking processes in mammalian cells and until yet two isoforms of SNAP-23 (SNAP-23a and SNAP-23b) have been described. In the present report, we have identified the existence of three new SNAP-23 isoforms (named SNAP-23c, SNAP-23d, and SNAP-23e), which arise from alternative splicing. By RT-PCR all five splice variants were shown to be expressed in four different human inflammatory cells (eosinophils, basophils, neutrophils, and peripheral blood mononuclear cells). Transfection of the human basophilic KU-812 cell line with plasmid constructs containing the cDNAs of the five splice variants located SNAP-23a and SNAP-23b primarily in the plasma membrane. The other three splice variants were localized both intracellularly and in the plasma membrane.

Original languageEnglish
JournalBiochemical and Biophysical Research Communications
Volume285
Issue number2
Pages (from-to)320-7
Number of pages8
ISSN0006-291X
DOIs
Publication statusPublished - 13 Jul 2001
Externally publishedYes

Keywords

  • Alternative Splicing
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Basophils
  • Carrier Proteins
  • Cell Line
  • Eosinophils
  • Exons
  • Genetic Variation
  • Granulocytes
  • Humans
  • Introns
  • Leukocytes, Mononuclear
  • Mammals
  • Molecular Sequence Data
  • Neutrophils
  • Protein Isoforms
  • Qb-SNARE Proteins
  • Qc-SNARE Proteins
  • Recombinant Fusion Proteins
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Transcription, Genetic
  • Transfection

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