Medical Microbiology and Immunology

2024

A clinical proteomics study of exhaled breath condensate and biomarkers for pulmonary embolism

Gade, I. L., Juul Riddersholm, S., Stilling-Vinther, T., Brøndum, R. F., Bennike, T. B. & Honoré, B., Jan 2024, In: Journal of Breath Research. 18, 1, 016007.

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2 Citations (Scopus)

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A methodological primer of extracellular vesicles isolation and characterization via different techniques

Aliakbari, F., Stocek, N. B., Cole-André, M., Gomes, J., Fanchini, G., Pasternak, S. H., Christiansen, G., Morshedi, D., Volkening, K. & Strong, M. J., 13 Feb 2024, In: Biology Methods and Protocols. 9, 1, bpae009.

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7 Citations (Scopus)

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Cholesterol-binding motifs in STING that control endoplasmic reticulum retention mediate anti-tumoral activity of cholesterol-lowering compounds

Zhang, B.-C., Laursen, M. F., Hu, L., Hazrati, H., Narita, R., Jensen, L. S., Hansen, A. S., Huang, J., Zhang, Y., Ding, X., Muyesier, M., Nilsson, E., Banasik, A., Zeiler, C., Mogensen, T. H., Etzerodt, A., Agger, R., Johannsen, M., Kofod-Olsen*, E. & Paludan*, S. R. & 1 others, Jakobsen*, M. R., 29 Mar 2024, In: Nature Communications. 15, 1 , 2760. *contributed equally.

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Novel nucleotide-packaging vaccine delivers antigen and poly(I:C) to dendritic cells and generate a potent antibody response in vivo

Bruun, N., Laursen, M. F., Carmelo, R., Christensen, E., Jensen, T. S., Christiansen, G., Birkelund, S., Agger, R. & Kofod-Olsen, E., 19 Apr 2024, In: Vaccine. 42, 11, p. 2909-2918 10 p.

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Pembrolizumab followed by irreversible electroporation of a liver metastasis in pancreatic cancer patients

Flak, R. V., Kofod-Olsen, E., Sølvsten, N. D., Naujokaite, G., Agger, R., Stender, M. T., Christensen, S., Shim, S., Poulsen, L. Ø., Detlefsen, S., Thorlasius-Ussing, O. & Ladekarl, M., 18 Oct 2024, In: iScience. 27, 10, 19 p., 111026.

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Predictive gene expression signature diagnoses neonatal sepsis before clinical presentation

An, A. Y., Acton, E., Idoko, O. T., Shannon, C. P., Blimkie, T. M., Falsafi, R., Wariri, O., Imam, A., Dibbasey, T., Bennike, T. B., Smolen, K. K., Diray-Arce, J., Ben-Othman, R., Montante, S., Angelidou, A., Odumade, O. A., Martino, D., Tebbutt, S. J., Levy, O. & Steen, H. & 5 others, Kollmann, T. R., Kampmann, B., Hancock, R. E. W., Lee, A. H. & EPIC Consortium, Dec 2024, In: EBioMedicine. 110, 105411.

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2023

Beta-lactam induced morphological changes in serum of extended-spectrum beta-lactamase-producing Klebsiella pneumoniae blood isolates

Opstrup, K. V., Christiansen, G. & Birkelund, S., Jan 2023, In: Microbes and Infection. 25, 1-2, 105036.

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4 Citations (Scopus)

Complement killing of clinical Klebsiella pneumoniae isolates is serum concentration dependent

Opstrup, K. V., Bennike, T. B., Christiansen, G. & Birkelund, S., May 2023, In: Microbes and Infection. 25, 4, 105074.

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3 Citations (Scopus)

Impaired Abcb1a function and red meat in a translational colitis mouse model induces inflammation and alters microbiota composition

Stensballe, A., Bennike, T. B., Ravn-Haren, G., Mortensen, A., Aboo, C., Knudsen, L. A., Rühlemann, M. C., Birkelund, S., Bang, C., Franke, A., Vogel, U., Hansen, A. K. & Andersen, V., 31 Jul 2023, In: Frontiers in Medicine. 10, 1200317.

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Inhibitory effects of fluorinated benzenesulfonamides on insulin fibrillation

Alijanvand, S. H., Ladefoged, L. K., Zubrienė, A., Sakalauskas, A., Christiansen, G., Dudutiene, V., Schiøtt, B., Matulis, D., Smirnovas, V. & Otzen, D. E., 1 Feb 2023, In: International Journal of Biological Macromolecules. 227, p. 590-600 11 p.

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Lack of neutralization of Chlamydia trachomatis infection by high avidity monoclonal antibodies to surface-exposed major outer membrane protein variable domain IV

Degn, L. L. T., Bech, D., Christiansen, G. & Birkelund, S., Nov 2023, In: Molecular Immunology. 163, p. 163-173 11 p.

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Trypanosoma brucei Invariant Surface gp65 Inhibits the Alternative Pathway of Complement by Accelerating C3b Degradation

Lorentzen, J., Olesen, H. G., Hansen, A. G., Thiel, S., Birkelund, S., Andersen, C. B. F. & Andersen, G. R., 20 Sept 2023, In: Journal of Immunology. 211, 5, p. 862-873 12 p.

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2 Citations (Scopus)

2022

Gold micro-particles for knee osteoarthritis

Rasmussen, S., Kjær Petersen, K., Kristiansen, M. K., Andersen, J. S., Aboo, C., Thomsen, M. E., Skjoldemose, E., Jørgensen, N. K., Stensballe, A. & Arendt-Nielsen, L., Apr 2022, In: European Journal of Pain. 26, 4, p. 811-824 14 p.

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9 Citations (Scopus)

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Interaction of membrane vesicles with the Pseudomonas functional amyloid protein FapC facilitates amyloid formation

Najarzadeh, Z., Mohammad-Beigi, H., Pedersen, J. N., Christiansen, G., Pedersen, J. S., Nielsen, J. & Otzen, D. E., Sept 2022, In: BBA advances. 2, 100055.

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Structural and functional analysis of broad pH and thermal stable protease from Penicillium aurantiogriseum URM 4622

Duarte Neto, J. M. W., Silva, J. D. C., Sousa, F., Gonçalves, O. S. L., Wanderley, M. C. D. A., Sarmento, B., Lima, C. D. A., Neves-Petersen, M. T. & Porto, A. L. F., 2022, In: Preparative Biochemistry and Biotechnology. 52, 5, p. 578-589 12 p.

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Structural Basis for Dityrosine-Mediated Inhibition of α-Synuclein Fibrillization

Sahin, C., Østerlund, E. C., Österlund, N., Costeira-Paulo, J., Pedersen, J. N., Christiansen, G., Nielsen, J., Grønnemose, A. L., Amstrup, S. K., Tiwari, M. K., Rao, R. S. P., Bjerrum, M. J., Ilag, L. L., Davies, M. J., Marklund, E. G., Pedersen, J. S., Landreh, M., Møller, I. M., Jørgensen, T. J. D. & Otzen, D. E., 13 Jul 2022, In: Journal of the American Chemical Society. 144, 27, p. 11949-11954 6 p.

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The Patent Ductus Arteriosus in Extremely Preterm Neonates Is More than a Hemodynamic Challenge: New Molecular Insights

Sellmer, A., Henriksen, T. B., Palmfeldt, J., Bech, B. H., Astono, J., Bennike, T. B. & Hjortdal, V. E., 25 Aug 2022, In: Biomolecules. 12, 9, 1179.

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Unravelling Heterogeneities in Complement and Antibody Opsonization of Individual Liposomes as a Function of Surface Architecture

Münter, R., Stavnsbjerg, C., Christensen, E., Thomsen, M. E., Stensballe, A., Hansen, A. E., Parhamifar, L., Kristensen, K., Simonsen, J. B., Larsen, J. B. & Andresen, T. L., 7 Apr 2022, In: Small. 18, 14, 2106529.

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17 Citations (Scopus)

Urine Proteomics Reveals Sex-Specific Response to Total Pancreatectomy with Islet Autotransplantation

Bennike, T. B., Templeton, K., Fujimura, K., Bellin, M. D., Ahmed, S., Schlaffner, C. N., Arora, R., Cruz-Monserrate, Z., Arnaout, R., Beilman, G. J., Groverc, A. S., Conwell, D. L. & Steen, H., May 2022, In: Pancreas. 51, 5, p. 435-444 10 p.

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1 Citation (Scopus)

2021

Analysis of complement deposition and processing on Chlamydia trachomatis

Lausen, M., Thomsen, M. E., Christiansen, G., Karred, N., Stensballe, A., Bennike, T. B. & Birkelund, S., Feb 2021, In: Medical Microbiology and Immunology. 210, 1, p. 13-32 20 p.

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8 Citations (Scopus)

Characterization of Insulin Dimers by Top-Down Mass Spectrometry

Gammelgaard, S. K., Petersen, S. B., Haselmann, K. F. & Nielsen, P. K., 2021, In: Journal of The American Society for Mass Spectrometry. 32, 8, p. 1910–1918

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2 Citations (Scopus)

Increased activity of procoagulant factors in patients with small cell lung cancer

Pedersen, S., Kristensen, A. F., Falkmer, U., Christiansen, G. & Kristensen, S. R., 21 Jul 2021, In: PLOS ONE. 16, 7, e0253613.

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Isolation methods commonly used to study the liposomal protein corona suffer from contamination issues

Kristensen, K., Münter, R., Kempen, P. J., Thomsen, M. E., Stensballe, A. & Andresen, T. L., Aug 2021, In: Acta Biomaterialia. 130, p. 460-472 13 p.

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23 Citations (Scopus)

Shotgun-based proteomics of extracellular vesicles in Alzheimer's disease reveals biomarkers involved in immunological and coagulation pathways

Nielsen, J. E., Honoré, B., Vestergård, K., Maltesen, R. G., Christiansen, G., Bøge, A. U., Kristensen, S. R. & Pedersen, S., 16 Sept 2021, In: Scientific Reports. 11, 1, 15 p., 18518.

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Stitching together a nm thick peptide-based semiconductor sheet using UV light

Alvarez, A. B., Pino, M., Petersen, S. B. & Fidelio, G. D., Jul 2021, In: Colloids and Surfaces B: Biointerfaces. 203, 111734.

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4 Citations (Scopus)

Synthesis, Self-Assembly and In Vitro Cellular Uptake Kinetics of Nanosized Drug Carriers Based on Aggregates of Amphiphilic Oligomers of N-Vinyl-2-pyrrolidone

Kulikov, P. P., Luss, A. L., Nelemans, L. C., Shtilman, M. I., Mezhuev, Y. O., Kuznetsov, I. A., Sizova, O. Y., Christiansen, G., Pennisi, P. & Gurevich, L., 11 Oct 2021, In: Materials. 14, 20, 13 p., 5977.

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2020

Aβ-Amyloid Fibrils Are Self-Triggered by the Interfacial Lipid Environment and Low Peptide Content

Alvarez, A. B., Caruso, B., Rodríguez, P. E. A., Petersen, S. B. & Fidelio, G. D., 21 Jul 2020, In: Langmuir : the ACS journal of surfaces and colloids. 36, 28, p. 8056-8065 10 p.

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10 Citations (Scopus)

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Complement mediated Klebsiella pneumoniae capsule changes

Jensen, T. S., Opstrup, K. V., Christiansen, G., Rasmussen, P. V., Thomsen, M. E., Justesen, D. L., Schønheyder, H. C., Lausen, M. & Birkelund, S., 2020, In: Microbes and Infection. 22, 1, p. 19-30 12 p.

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20 Citations (Scopus)

Direct Ultraviolet Laser-Induced Reduction of Disulfide Bonds in Insulin and Vasopressin

Gammelgaard, S. K., Petersen, S. B., Haselmann, K. F. & Nielsen, P. K., 14 Apr 2020, In: ACS Omega. 5, 14, p. 7962-7968 7 p.

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12 Citations (Scopus)

Effects of moderate electric fields on cold-set gelation of whey proteins – From molecular interactions to functional properties

Rodrigues, R. M., Fasolin, L. H., Avelar, Z., Petersen, S. B., Vicente, A. A. & Pereira, R. N., Apr 2020, In: Food Hydrocolloids. 101, 105505.

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48 Citations (Scopus)

Influence of moderate electric fields in β-lactoglobulin thermal unfolding and interactions

Rodrigues, R. M., Avelar, Z., Vicente, A. A., Petersen, S. B. & Pereira, R. N., 30 Jan 2020, In: Food Chemistry. 304, 125442.

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50 Citations (Scopus)

Multi-step thermally induced transitions of β-lactoglobulin – An in situ spectroscopy approach

Rodrigues, R. M., Claro, B., Bastos, M., Pereira, R. N., Vicente, A. A. & Petersen, S. B., Jan 2020, In: International Dairy Journal. 100, 104562.

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7 Citations (Scopus)

Novel Blood-Derived Extracellular Vesicle-Based Biomarkers in Alzheimer's Disease Identified by Proximity Extension Assay

Ellegaard Nielsen, J., Sofie Pedersen, K., Vestergård, K., Georgiana Maltesen, R., Christiansen, G., Lundbye-Christensen, S., Moos, T., Risom Kristensen, S. & Pedersen, S., 7 Jul 2020, In: Biomedicines. 8, 7, 199.

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Opsonophagocytosis of Chlamydia pneumoniae by human monocytes and neutrophils

Lausen, M., Pedersen, M. S., Rahman, N. S. K., Holm-Nielsen, L. T., Farah, F. Y. M., Christiansen, G. & Birkelund, S., 22 Jun 2020, In: Infection and Immunity. 88, 7, e00087-20.

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Preparing for Life: Plasma Proteome Changes and Immune System Development During the First Week of Human Life

Bennike, T. B., Fatou, B., Angelidou, A., Diray-Arce, J., Falsafi, R., Ford, R., Gill, E. E., van Haren, S. D., Idoko, O. T., Lee, A. H., Ben-Othman, R., Pomat, W. S., Shannon, C. P., Smolen, K. K., Tebbutt, S. J., Ozonoff, A., Richmond, P. C., Biggelaar, A. H. J. V. D., Hancock, R. E. W. & Kampmann, B. & 3 others, Kollmann, T. R., Levy, O. & Steen, H., 20 Oct 2020, In: Frontiers in Immunology. 11, 578505.

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21 Citations (Scopus)

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Proteomic analysis of synovial fluid from rheumatic arthritis and spondyloarthritis patients

Birkelund, S., Bennike, T. B., Kastaniegaard, K., Lausen, M., Poulsen, T. B. G., Kragstrup, T. W., Deleuran, B. W., Christiansen, G. & Stensballe, A., 2020, In: Clinical proteomics. 17, 1, 29.

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28 Citations (Scopus)

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2019

Characterization of rat primary trigeminal satellite glial cells and associated extracellular vesicles under normal and inflammatory conditions

Vinterhøj, H. S. H., Stensballe, A., Duroux, M. & Gazerani, P., 6 Jan 2019, In: Journal of Proteomics. 190, p. 27-34 8 p.

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16 Citations (Scopus)

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Contention over undergraduate medical curriculum content

Andersen, S., Stentoft, D., Emmersen, J., Rasmussen, S., Birkelund, S. & Nøhr, S., 16 Dec 2019, In: International Journal of Medical Education. 10, p. 230-231 2 p.

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7 Citations (Scopus)

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Data from quantitative serum proteomic analysis after laparoscopic gastric plication

Savedoroudi, P., Bennike, T. B., Kastaniegaard, K., Talebpour, M., Ghassempour, A. & Stensballe, A., 1 Aug 2019, In: Data in Brief. 25, 8 p., 104077.

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2 Citations (Scopus)

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Degradation of the extracellular matrix is part of the pathology of ulcerative colitis

Kirov, S., Sasson, A., Zhang, C., Chasalow, S., Dongre, A., Steen, H., Stensballe, A., Andersen, V., Birkelund, S. & Bennike, T. B., 31 Jan 2019, In: Molecular Omics. 15, 1, p. 67-76 10 p.

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Dual strategy for reduced signal-suppression effects in matrix-assisted laser desorption/ionization mass spectrometry imaging

Bastrup, J., Birkelund, S., Asuni, A., Volbracht, C. & Stensballe, A., 30 Nov 2019, In: Rapid communications in mass spectrometry : RCM. 33, 22, p. 1711-1721 11 p.

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Dynamic molecular changes during the first week of human life follow a robust developmental trajectory

Lee, A. H., Shannon, C. P., Amenyogbe, N., Bennike, T. B., Diray-Arce, J., Idoko, O. T., Gill, E. E., Ben-Othman, R., Pomat, W. S., van Haren, S. D., Cao, K. A. L., Cox, M., Darboe, A., Falsafi, R., Ferrari, D., Harbeson, D. J., He, D., Bing, C., Hinshaw, S. J. & Ndure, J. & 24 others, Njie-Jobe, J., Pettengill, M. A., Richmond, P. C., Ford, R., Saleu, G., Masiria, G., Matlam, J. P., Kirarock, W., Roberts, E., Malek, M., Sanchez-Schmitz, G., Singh, A., Angelidou, A., Smolen, K. K., The EPIC Consortium, Brinkman, R. R., Ozonoff, A., Hancock, R. E. W., van den Biggelaar, A. H. J., Steen, H., Tebbutt, S. J., Kampmann, B., Levy, O. & Kollmann, T. R., 12 Mar 2019, In: Nature Communications. 10, 1, 14 p., 1092.

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Evaluation of Targeted Delivery to the Brain Using Magnetic Immunoliposomes and Magnetic Force

Thomsen, L. B., Linemann, T., Birkelund, S., Tarp, G. A. & Moos, T., 31 Oct 2019, In: Materials. 12, 21, 3576.

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Exploration of extracellular vesicles from Ascaris suum provides evidence of parasite–host cross talk

Hansen, E. P., Fromm, B., Andersen, S. D., Marcilla, A., Andersen, K. L., Borup, A., Williams, A. R., Jex, A. R., Gasser, R. B., Young, N. D., Hall, R. S., Stensballe, A., Ovchinnikov, V., Yan, Y., Fredholm, M., Thamsborg, S. M. & Nejsum, P., 2019, In: Journal of Extracellular Vesicles. 8, 1, p. 1-13 13 p., 1578116.

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Immunobiology of monocytes and macrophages during Chlamydia trachomatis infection

Nielsen, M. L., Christiansen, G., Poulsen, T. B. G. & Birkelund, S., 1 Mar 2019, In: Microbes and Infection. 21, 2, p. 73-84 12 p.

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On the functional compartmentalization of the normal middle ear. Morpho-histological modelling parameters of its mucosa

Padurariu, S., Röösli, C., Røge, R., Stensballe, A., Vyberg, M., Huber, A. & Gaihede, M., Jul 2019, In: Hearing Research. 378, p. 176-184 9 p.

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Personalized Rheumatic Medicine through Dose Reduction Reduces the Cost of Biological Treatment – a retrospective intervention analysis

Meyer, M. K., Andersen, M., Ring, T., Andersen, G. N., Ehlers, L. H., Rasmussen, C. & Stensballe, A., 3 Sept 2019, In: Scandinavian Journal of Rheumatology. 48, 5, p. 398-407 10 p.

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4 Citations (Scopus)

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Proteomic and Post-Translational Modification Profiling of Exosome-Mimetic Nanovesicles Compared to Exosomes

Kenari, A. N., Kastaniegaard, K., Greening, D. W., Shambrook, M., Stensballe, A., Cheng, L. & Hill, A. F., Apr 2019, In: Proteomics. 19, 8, 20 p., 1800161.

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Rapid Proteome Changes in Plasma and Cerebrospinal Fluid Following Bacterial Infection in Preterm Newborn Pigs

Muk, T., Stensballe, A., Pankratova, S., Nguyen, D. N., Brunse, A., Sangild, P. T. & Jiang, P.-P., 2019, In: Frontiers in Immunology. 10, p. 2651 2651.

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Serum proteome changes and accelerated reduction of fat mass after laparoscopic gastric plication in morbidly obese patients

Savedoroudi, P., Bennike, T. B., Kastaniegaard, K., Talebpour, M., Ghassempour, A. & Stensballe, A., 15 Jul 2019, In: Journal of Proteomics. 203, 103373.

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Medical Microbiology and Immunology

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